RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SLC5A4Q9NY91 659 aa15.07■□□□□ 0
ATG3-202ENST00000402314 TCEAL9Q9UHQ7 104 aa15.07■□□□□ 0
ATG3-202ENST00000402314 TMEM120BA0PK00 339 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ANKRD62A6NC57 917 aa15.06■□□□□ 0
ATG3-202ENST00000402314 PEX10O60683 326 aa15.06■□□□□ 0
ATG3-202ENST00000402314 DLATP10515 647 aaKnown RBP15.06■□□□□ 0
ATG3-202ENST00000402314 CHRNB2P17787 502 aa15.06■□□□□ 0
ATG3-202ENST00000402314 SSTR3P32745 418 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 KIF22Q14807 665 aa15.06■□□□□ 0
ATG3-202ENST00000402314 AP1ARQ63HQ0 302 aa15.06■□□□□ 0
ATG3-202ENST00000402314 LLGL2Q6P1M3 1020 aa15.06■□□□□ 0
ATG3-202ENST00000402314 SLITRK6Q9H5Y7 841 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ZDHHC18Q9NUE0 388 aa15.06■□□□□ 0
ATG3-202ENST00000402314 STK32BQ9NY57 414 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ZNRF3Q9ULT6 936 aa15.06■□□□□ 0
ATG3-202ENST00000402314 SYNPO2Q9UMS6 1093 aa15.06■□□□□ 0
ATG3-202ENST00000402314 NCANO14594 1321 aa15.06■□□□□ 0
ATG3-202ENST00000402314 RPTORQ8N122 1335 aa15.06■□□□□ 0
ATG3-202ENST00000402314 SMNDC1O75940 238 aaKnown RBP eCLIP15.06■□□□□ 0
ATG3-202ENST00000402314 PCK1P35558 622 aa15.06■□□□□ 0
ATG3-202ENST00000402314 BAATQ14032 418 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 CNGA2Q16280 664 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ZDHHC24Q6UX98 284 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ANO5Q75V66 913 aa15.06■□□□□ 0
ATG3-202ENST00000402314 EXOC3L1Q86VI1 746 aa15.06■□□□□ 0
ATG3-202ENST00000402314 SLC9A9Q8IVB4 645 aa15.06■□□□□ 0
ATG3-202ENST00000402314 TAS1R2Q8TE23 839 aa15.06■□□□□ 0
ATG3-202ENST00000402314 CALR3Q96L12 384 aaKnown RBP15.06■□□□□ 0
ATG3-202ENST00000402314 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
ATG3-202ENST00000402314 KCND2Q9NZV8 630 aa15.06■□□□□ 0
ATG3-202ENST00000402314 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 INTUQ9ULD6 942 aa15.06■□□□□ 0
ATG3-202ENST00000402314 USP15Q9Y4E8 981 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 RBBP6Q7Z6E9 1792 aaKnown RBP15.06■□□□□ 0
ATG3-202ENST00000402314 SPDYE5A6NIY4 337 aa15.06■□□□□ 0
ATG3-202ENST00000402314 CES2O00748 559 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ASAP2O43150 1006 aa15.06■□□□□ 0
ATG3-202ENST00000402314 BCRP11274 1271 aa15.06■□□□□ 0
ATG3-202ENST00000402314 ATP2A2P16615 1042 aaKnown RBP15.06■□□□□ 0
ATG3-202ENST00000402314 VCAM1P19320 739 aa15.06■□□□□ 0
ATG3-202ENST00000402314 COPS2P61201 443 aa15.06■□□□□ 0
ATG3-202ENST00000402314 POU5F1Q01860 360 aaKnown RBP15.06■□□□□ 0
ATG3-202ENST00000402314 ZNF268Q14587 947 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 ZNF449Q6P9G9 518 aa15.06■□□□□ 0
ATG3-202ENST00000402314 RAB17Q9H0T7 212 aa15.06■□□□□ 0
ATG3-202ENST00000402314 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
ATG3-202ENST00000402314 SLC38A10Q9HBR0 1119 aa15.06■□□□□ 0
ATG3-202ENST00000402314 LINGO3P0C6S8 592 aa15.05■□□□□ 0
ATG3-202ENST00000402314 COMTP21964 271 aa15.05■□□□□ 0
ATG3-202ENST00000402314 NPTX2P47972 431 aa15.05■□□□□ 0
ATG3-202ENST00000402314 SNRNP35Q16560 246 aaKnown RBP15.05■□□□□ 0
ATG3-202ENST00000402314 DAB2IPQ5VWQ8 1189 aa15.05■□□□□ 0
ATG3-202ENST00000402314 DUPD1Q68J44 220 aa15.05■□□□□ 0
ATG3-202ENST00000402314 LONP2Q86WA8 852 aa15.05■□□□□ 0
ATG3-202ENST00000402314 CCDC105Q8IYK2 499 aa15.05■□□□□ 0
ATG3-202ENST00000402314 RTKN2Q8IZC4 609 aa15.05■□□□□ 0
ATG3-202ENST00000402314 EPS8L1Q8TE68 723 aa15.05■□□□□ 0
ATG3-202ENST00000402314 ARHGEF2Q92974 986 aaKnown RBP15.05■□□□□ 0
ATG3-202ENST00000402314 PDCD2LQ9BRP1 358 aa15.05■□□□□ 0
ATG3-202ENST00000402314 TRIM7Q9C029 511 aa15.05■□□□□ 0
ATG3-202ENST00000402314 CTDP1Q9Y5B0 961 aaPredicted RBP15.05■□□□□ 0
ATG3-202ENST00000402314 DENND3A2RUS2 1198 aa15.05■□□□□ -0
ATG3-202ENST00000402314 DPPA5A6NC42 116 aa15.05■□□□□ -0
ATG3-202ENST00000402314 KIAA0391O15091 583 aaKnown RBP15.05■□□□□ -0
ATG3-202ENST00000402314 TBC1D12O60347 775 aa15.05■□□□□ -0
ATG3-202ENST00000402314 UBE4BO95155 1302 aa15.05■□□□□ -0
ATG3-202ENST00000402314 CNGA1P29973 690 aa15.05■□□□□ -0
ATG3-202ENST00000402314 CTCFP49711 727 aaPredicted RBP15.05■□□□□ -0
ATG3-202ENST00000402314 AUHQ13825 339 aaKnown RBP15.05■□□□□ -0
ATG3-202ENST00000402314 ARHGEF16Q5VV41 709 aa15.05■□□□□ -0
ATG3-202ENST00000402314 PCNX4Q63HM2 1172 aa15.05■□□□□ -0
ATG3-202ENST00000402314 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
ATG3-202ENST00000402314 PRUNE1Q86TP1 453 aa15.05■□□□□ -0
ATG3-202ENST00000402314 FAM118BQ9BPY3 351 aa15.05■□□□□ -0
ATG3-202ENST00000402314 TMEM206Q9H813 350 aa15.05■□□□□ -0
ATG3-202ENST00000402314 ADGRA3Q8IWK6 1321 aa15.04■□□□□ -0
ATG3-202ENST00000402314 ZNF862O60290 1169 aa15.04■□□□□ -0
ATG3-202ENST00000402314 ANXA13P27216 316 aa15.04■□□□□ -0
ATG3-202ENST00000402314 LACTBP83111 547 aaPredicted RBP15.04■□□□□ -0
ATG3-202ENST00000402314 ATP11AP98196 1134 aa15.04■□□□□ -0
ATG3-202ENST00000402314 MPP2Q14168 576 aa15.04■□□□□ -0
ATG3-202ENST00000402314 TTC27Q6P3X3 843 aa15.04■□□□□ -0
ATG3-202ENST00000402314 RNF207Q6ZRF8 634 aa15.04■□□□□ -0
ATG3-202ENST00000402314 TEPSINQ96N21 525 aa15.04■□□□□ -0
ATG3-202ENST00000402314 NSRP1Q9H0G5 558 aaKnown RBP15.04■□□□□ -0
ATG3-202ENST00000402314 COL2A1P02458 1487 aaPredicted RBP15.04■□□□□ -0
ATG3-202ENST00000402314 SMIM24O75264 130 aa15.04■□□□□ -0
ATG3-202ENST00000402314 TARSP26639 723 aaKnown RBP15.04■□□□□ -0
ATG3-202ENST00000402314 PDE6CP51160 858 aa15.04■□□□□ -0
ATG3-202ENST00000402314 EIF3BP55884 814 aaKnown RBP15.04■□□□□ -0
ATG3-202ENST00000402314 ITIH4Q14624 930 aa15.04■□□□□ -0
ATG3-202ENST00000402314 NBPF12Q5TAG4 269 aaPredicted RBP15.04■□□□□ -0
ATG3-202ENST00000402314 CDCA2Q69YH5 1023 aaPredicted RBP15.04■□□□□ -0
ATG3-202ENST00000402314 SLC39A4Q6P5W5 647 aa15.04■□□□□ -0
ATG3-202ENST00000402314 FAM83AQ86UY5 434 aa15.04■□□□□ -0
ATG3-202ENST00000402314 KCTD17Q8N5Z5 321 aa15.04■□□□□ -0
ATG3-202ENST00000402314 SPOCK2Q92563 424 aa15.04■□□□□ -0
ATG3-202ENST00000402314 P3H4Q92791 437 aa15.04■□□□□ -0
ATG3-202ENST00000402314 GOLGA6L10A0A0M3HER8 536 aa15.03■□□□□ -0
ATG3-202ENST00000402314 PLA2G6O60733 806 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms