RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ANXA13P27216 316 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 NSFP46459 744 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 CPA2P48052 419 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 STAT2P52630 851 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 FMO1Q01740 532 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 MGAT5Q09328 741 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 GPS1Q13098 491 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 ZNF268Q14587 947 aaPredicted RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 KIF22Q14807 665 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 FASTKD3Q14CZ7 662 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 CEP55Q53EZ4 464 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 FOXR2Q6PJQ5 311 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 ZC3H3Q8IXZ2 948 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 CCHCR1Q8TD31 782 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 PLEKHO2Q8TD55 490 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 DCAF4Q8WV16 495 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 RAB3IPQ96QF0 476 aaPredicted RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 ACCSQ96QU6 501 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 KIAA1683Q9H0B3 1180 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 TRABDQ9H4I3 376 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 GAKO14976 1311 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 EIF3DO15371 548 aaKnown RBP eCLIP9.75□□□□□ -0.85
HPS4-203ENST00000402105 BBOX1O75936 387 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 ITIH2P19823 946 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 NT5C2P49902 561 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 DRG2P55039 364 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 BTNL9Q6UXG8 535 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 GBP7Q8N8V2 638 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 ARMC2Q8NEN0 867 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 FAM213AQ9BRX8 229 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 SAE1Q9UBE0 346 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 IRS2Q9Y4H2 1338 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 A0A1W2PPM1 405 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 FAM47DPA6NHR8 397 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 SGK1O00141 431 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 TBX3O15119 743 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 ADRB2P07550 413 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 HOXA7P31268 230 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 RPA3P35244 121 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 MAGEA4P43358 317 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 CLUL1Q15846 466 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 SNRNP35Q16560 246 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 BMT2Q1RMZ1 405 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 NBPF20Q3BBV1 942 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 TAF1BQ53T94 588 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 C11orf63Q6NUN7 778 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 NAF1Q96HR8 494 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 ROPN1BQ9BZX4 212 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 ROPN1Q9HAT0 212 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 NENFQ9UMX5 172 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 ANKRD36CQ5JPF3 1778 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 C2orf71A6NGG8 1288 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 CDH16O75309 829 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 PIK3CAP42336 1068 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 SMAD1Q15797 465 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 SEZ6Q53EL9 994 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 DPH6Q7L8W6 267 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 MTDHQ86UE4 582 aaKnown RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 GLIS1Q8NBF1 620 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 FAM163AQ96GL9 167 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
HPS4-203ENST00000402105 RPS6KC1Q96S38 1066 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 MKNK1Q9BUB5 465 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 EBF2Q9HAK2 575 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.75□□□□□ -0.855e-8■■■■■ 32.9
HPS4-203ENST00000402105 TXLNGQ9NUQ3 528 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 CNTNAP4Q9C0A0 1308 aa9.75□□□□□ -0.85
HPS4-203ENST00000402105 HNRNPDLO14979 420 aaKnown RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 MAPK13O15264 365 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 ALAS1P13196 640 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 TAC1P20366 129 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 ARSEP51690 589 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 POLE2P56282 527 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 PPP1R21Q6ZMI0 780 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 SIAH1Q8IUQ4 282 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 VPS52Q8N1B4 723 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 ATL2Q8NHH9 583 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 SPATS2LQ9NUQ6 558 aaKnown RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 NEU2Q9Y3R4 380 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 CTDP1Q9Y5B0 961 aaPredicted RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 CTCFP49711 727 aaPredicted RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 WDR4P57081 412 aaKnown RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 PDIA2Q13087 525 aaKnown RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 CRELD2Q6UXH1 353 aaPredicted RBP9.74□□□□□ -0.85
HPS4-203ENST00000402105 DAW1Q8N136 415 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 OLIG1Q8TAK6 271 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms