RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.72
GABRB3-203ENST00000400188 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.72
GABRB3-203ENST00000400188 AGO2Q9UKV8 859 aaKnown RBP10.52□□□□□ -0.72
GABRB3-203ENST00000400188 TRIP11Q15643 1979 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 MYO9BQ13459 2157 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 RFXAPO00287 272 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 OGTO15294 1046 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 SKIP12755 728 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 FXR1P51114 621 aaKnown RBP eCLIP10.52□□□□□ -0.73
GABRB3-203ENST00000400188 CYP2J2P51589 502 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
GABRB3-203ENST00000400188 NOMO2Q5JPE7 1267 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 PPP2R2DQ66LE6 453 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 KLHL10Q6JEL2 608 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 STXBP4Q6ZWJ1 553 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-203ENST00000400188 CCDC47Q96A33 483 aaKnown RBP10.52□□□□□ -0.73
GABRB3-203ENST00000400188 PGBD4Q96DM1 585 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 NCAPGQ9BPX3 1015 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 PAAF1Q9BRP4 392 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 TMEM117Q9H0C3 514 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 GOLGA2P5Q9HBQ8 144 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 RMND1Q9NWS8 449 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 RSPH14Q9UHP6 348 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
GABRB3-203ENST00000400188 EXOC7Q9UPT5 735 aa10.52□□□□□ -0.73
GABRB3-203ENST00000400188 C5orf42Q9H799 3197 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 CSPG5O95196 566 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 SCP2P22307 547 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 ZNF165P49910 485 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-203ENST00000400188 STX1AQ16623 288 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 ICE2Q659A1 982 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 ALKAL1Q6UXT8 129 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 CBWD2Q8IUF1 395 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 ADSSL1Q8N142 457 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 GUF1Q8N442 669 aaKnown RBP10.51□□□□□ -0.73
GABRB3-203ENST00000400188 C18orf25Q96B23 403 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-203ENST00000400188 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 SNX27Q96L92 541 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 ACAP3Q96P50 834 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 NRDE2Q9H7Z3 1164 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 SLC28A3Q9HAS3 691 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 HSPBP1Q9NZL4 362 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 MSRAQ9UJ68 235 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 PYCARDQ9ULZ3 195 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 GIT1Q9Y2X7 761 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 UBE4BO95155 1302 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 A0A0C4DFX4 3053 aa10.51□□□□□ -0.73
GABRB3-203ENST00000400188 SMIM28A0A1B0GU29 152 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 LACTBL1A8MY62 500 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ABCD1P33897 745 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CASP4P49662 377 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 GUCY2FP51841 1108 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 NAB2Q15742 525 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 RAB30Q15771 203 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 DPCR1Q3MIW9 517 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ZCWPW2Q504Y3 356 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 SLFN12LQ6IEE8 588 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CMTR2Q8IYT2 770 aaKnown RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ARNTL2Q8WYA1 636 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 MED15Q96RN5 788 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 DNAJC25Q9H1X3 360 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 TTC26A0AVF1 554 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ADRB2P07550 413 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CLTAP09496 248 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 GARTP22102 1010 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CASQ1P31415 396 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ZNF75DP51815 510 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 STX17P56962 302 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 RNASELQ05823 741 aaKnown RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 GPS2Q13227 327 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 SPOUT1Q5T280 376 aaKnown RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ANKRD40Q6AI12 368 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 SARM1Q6SZW1 724 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 C11orf57Q6ZUT1 292 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 LRRC43Q8N309 656 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 BCL7CQ8WUZ0 217 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ZNF576Q9H609 170 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CTNND2Q9UQB3 1225 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 PTPRJQ12913 1337 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 VCANP13611 3396 aa10.5□□□□□ -0.73
GABRB3-203ENST00000400188 CASTOR2A6NHX0 329 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 PDXKO00764 312 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 INPPL1O15357 1258 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 HOXA2O43364 376 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 NR3C1P04150 777 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 ITGB1P05556 798 aa10.49□□□□□ -0.73
GABRB3-203ENST00000400188 NFICP08651 508 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms