RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 FCER1AP12319 257 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 TP53BP2Q13625 1128 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 SH3GL2Q99962 352 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 FGFR4P22455 802 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ACTR2P61160 394 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 KDSRQ06136 332 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 MRPS26Q9BYN8 205 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 MYL2P10916 166 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 DNAL1Q4LDG9 190 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 PPP1R2P1Q96PQ5 205 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ZCWPW1Q9H0M4 648 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 TBC1D23Q9NUY8 699 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 KRT75O95678 551 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 PLA2G4AP47712 749 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 PSMC5P62195 406 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 SH3GL3Q99963 347 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 SEPT3Q9UH03 358 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 FOXP2O15409 715 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 RTN2O75298 545 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 DUOXA2Q1HG44 320 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 LONP2Q86WA8 852 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 DGKHQ86XP1 1220 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 SESN1Q9Y6P5 492 aa12.94□□□□□ -0.34
CACNA1C-219ENST00000399649 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 LTKP29376 864 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 FGD2Q7Z6J4 655 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 DTNBP1Q96EV8 351 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CNBD2Q96M20 576 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 OSBPL3Q9H4L5 887 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 NSMCE4AQ9NXX6 385 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CACNA2D2Q9NY47 1150 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 POTECB2RU33 542 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 IRF1P10914 325 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CCDC15Q0P6D6 951 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 C6orf10Q5SRN2 563 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CAPRIN2Q6IMN6 1127 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PCYOX1LQ8NBM8 494 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 BPIFA3Q9BQP9 254 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 TRABDQ9H4I3 376 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 COPB2P35606 906 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PRUNE1Q86TP1 453 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CDR2LQ86X02 465 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 CNPY4Q8N129 248 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 RUBCNQ92622 972 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 DDX47Q9H0S4 455 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 SESN2P58004 480 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 INPP5DQ92835 1189 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 ZNF668Q96K58 619 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 LXNQ9BS40 222 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 HSPBP1Q9NZL4 362 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 SLC30A1Q9Y6M5 507 aa12.93□□□□□ -0.34
CACNA1C-219ENST00000399649 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 IL31Q6EBC2 164 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 POLE3Q9NRF9 147 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 NUP62P37198 522 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 SERPINB9P50453 376 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 USP10Q14694 798 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 GID8Q9NWU2 228 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 NEO1Q92859 1461 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 TSPOAP1O95153 1857 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms