RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 COL9A2Q14055 689 aaPredicted RBP19.99■□□□□ 0.79
UFD1-202ENST00000399523 GAS6Q14393 721 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 NPY5RQ15761 445 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 FAM78AQ5JUQ0 283 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 PRSS36Q5K4E3 855 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 IL31Q6EBC2 164 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.99■□□□□ 0.79
UFD1-202ENST00000399523 ZNF334Q9HCZ1 680 aaPredicted RBP19.99■□□□□ 0.79
UFD1-202ENST00000399523 BACE2Q9Y5Z0 518 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 CDY1Q9Y6F8 540 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 GREB1Q4ZG55 1949 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 IGF2RP11717 2491 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 TICRRQ7Z2Z1 1910 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 ARHGEF37A1IGU5 675 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 CHURC1-FNTBB4DL54 471 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 MICAL2O94851 1124 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 PAPSS2O95340 614 aaPredicted RBP19.98■□□□□ 0.79
UFD1-202ENST00000399523 FNTBP49356 437 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 INF2Q27J81 1249 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 SPEM1Q8N4L4 309 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 HAS1Q92839 578 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 PIAS3Q9Y6X2 628 aa19.98■□□□□ 0.79
UFD1-202ENST00000399523 NRG2O14511 850 aaPredicted RBP19.97■□□□□ 0.79
UFD1-202ENST00000399523 TBX3O15119 743 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 KCNA4P22459 653 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 GLRA2P23416 452 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 SRSF5Q13243 272 aaKnown RBP19.97■□□□□ 0.79
UFD1-202ENST00000399523 CTTNQ14247 550 aaKnown RBP19.97■□□□□ 0.79
UFD1-202ENST00000399523 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 GALNT17Q6IS24 598 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 LONP2Q86WA8 852 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 FAM177A1Q8N128 213 aaPredicted RBP19.97■□□□□ 0.79
UFD1-202ENST00000399523 DYDC2Q96IM9 177 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 ASB16Q96NS5 453 aa19.97■□□□□ 0.79
UFD1-202ENST00000399523 SPEGQ15772 3267 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 TMEM189-UBE2V1I3L0A0 370 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 K7ESF4 209 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 DGAT1O75907 488 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 PROS1P07225 676 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 PSMC3P17980 439 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 MLLT6P55198 1093 aaPredicted RBP19.96■□□□□ 0.79
UFD1-202ENST00000399523 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 KRT25Q7Z3Z0 450 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 FAM160A2Q8N612 972 aaPredicted RBP19.96■□□□□ 0.79
UFD1-202ENST00000399523 ZNF461Q8TAF7 563 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 TCEAL4Q96EI5 215 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 PRIMPOLQ96LW4 560 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 CXCL16Q9H2A7 254 aa19.96■□□□□ 0.79
UFD1-202ENST00000399523 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
UFD1-202ENST00000399523 SH2B1Q9NRF2 756 aaPredicted RBP19.96■□□□□ 0.79
UFD1-202ENST00000399523 ZNF197O14709 1029 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 SLITRK3O94933 977 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 GCFC2P16383 781 aaKnown RBP19.95■□□□□ 0.78
UFD1-202ENST00000399523 IGFBP6P24592 240 aaPredicted RBP19.95■□□□□ 0.78
UFD1-202ENST00000399523 PDIA3P30101 505 aaKnown RBP19.95■□□□□ 0.78
UFD1-202ENST00000399523 GDI1P31150 447 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
UFD1-202ENST00000399523 EVCP57679 992 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 CYP4A11Q02928 519 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 PTGDRQ13258 359 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 VITQ6UXI7 678 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 ANKS3Q6ZW76 656 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 TRIM22Q8IYM9 498 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 KCNB2Q92953 911 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 SNTG2Q9NY99 539 aa19.95■□□□□ 0.78
UFD1-202ENST00000399523 WDR27A2RRH5 827 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 ARNTLO00327 626 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 RECQL4O94761 1208 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 ABLIM3O94929 683 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 LYPLA2O95372 231 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 LRG1P02750 347 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 CCNE1P24864 410 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 HOXA6P31267 233 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 CCR2P41597 374 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 NCAPH2Q6IBW4 605 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 SLC8B1Q6J4K2 584 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 CD300LGQ6UXG3 332 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 TPH2Q8IWU9 490 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 DEPDC1BQ8WUY9 529 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 SMARCD2Q92925 531 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 DDX27Q96GQ7 796 aaKnown RBP19.94■□□□□ 0.78
UFD1-202ENST00000399523 CORO1BQ9BR76 489 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 FZD8Q9H461 694 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 ANKEF1Q9NU02 776 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 PRMT7Q9NVM4 692 aaPredicted RBP19.94■□□□□ 0.78
UFD1-202ENST00000399523 LAMA1P25391 3075 aa19.94■□□□□ 0.78
UFD1-202ENST00000399523 B3GAT3O94766 335 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 DEXIO95424 95 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 TKTP29401 623 aaKnown RBP19.93■□□□□ 0.78
UFD1-202ENST00000399523 CCT2P78371 535 aaKnown RBP19.93■□□□□ 0.78
UFD1-202ENST00000399523 SSRP1Q08945 709 aaKnown RBP19.93■□□□□ 0.78
UFD1-202ENST00000399523 FAM187BQ17R55 369 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 AASDHQ4L235 1098 aaPredicted RBP19.93■□□□□ 0.78
UFD1-202ENST00000399523 BLOC1S2Q6QNY1 142 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 NEK8Q86SG6 692 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 MSANTD3Q96H12 275 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 ZSWIM3Q96MP5 696 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 JAKMIP1Q96N16 626 aaKnown RBP19.93■□□□□ 0.78
UFD1-202ENST00000399523 PDZD7Q9H5P4 517 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms