RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CNNM3Q8NE01 707 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 BLZF1Q9H2G9 400 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ANO10Q9NW15 660 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 QPCTLQ9NXS2 382 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PSD3Q9NYI0 1048 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PAXBP1Q9Y5B6 917 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZMYM6O95789 1325 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 KRBA1A5PL33 1030 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 SUSD5O60279 629 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 SRGAP2O75044 1071 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 KRT38O76015 456 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 BMP6P22004 513 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 TOB1P50616 345 aaPredicted RBP6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 FXR1P51114 621 aaKnown RBP eCLIP6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 AP2B1P63010 937 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 PPARAQ07869 468 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 TRIM28Q13263 835 aaKnown RBP6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 CCDC152Q4G0S7 254 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 ADALQ6DHV7 355 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 OLFM4Q6UX06 510 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 LRRC8AQ8IWT6 810 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 OR52K2Q8NGK3 314 aa6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 UNKQ9C0B0 810 aaKnown RBP6.71□□□□□ -1.33
TRAPPC13-202ENST00000399438 BCORQ6W2J9 1755 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAGEB6P1A0A0J9YX57 407 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 A0A0U1RQJ8 604 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 NTSR2O95665 410 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 TFRCP02786 760 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 MYCLP12524 364 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 FGFR2P21802 821 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 SESN3P58005 492 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CTAG1AP78358 180 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ADAM15Q13444 863 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 KCNB1Q14721 858 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 NTRK3Q16288 839 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAJINQ3KP22 176 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 IQSEC1Q6DN90 963 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ARMCX5Q6P1M9 558 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 GK5Q6ZS86 529 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CACNA2D3Q8IZS8 1091 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 FBXO30Q8TB52 745 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 RRP36Q96EU6 259 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 TMEM237Q96Q45 408 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CERS4Q9HA82 394 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 DMRT3Q9NQL9 472 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ABCC12Q96J65 1359 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 PITPNM1O00562 1244 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 TSPAN3O60637 253 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 RTN2O75298 545 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 SGPL1O95470 568 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CSTBP04080 98 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 JMJD7P0C870 316 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 EEF2P13639 858 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 SCTRP47872 440 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 FXR2P51116 673 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPARDQ03181 441 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 ICA1Q05084 483 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 SMAD1Q15797 465 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 TXNRD1Q16881 649 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 KIAA0753Q2KHM9 967 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 LRRFIP1Q32MZ4 808 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 RFX8Q6ZV50 586 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CEP97Q8IW35 865 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCDC170Q8IYT3 715 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 SUN5Q8TC36 379 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 KCNH3Q9ULD8 1083 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 HPCAL4Q9UM19 191 aa6.71□□□□□ -1.34
TRAPPC13-202ENST00000399438 UBR3Q6ZT12 1888 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 SCN7AQ01118 1682 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 ERICH2A1L162 156 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 H0YC42 278 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 AP3B1O00203 1094 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 CACNB4O00305 520 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPFIA2O75334 1257 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 CELA3AP09093 270 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 ARL4CP56559 192 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 NFIXQ14938 502 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 WDR73Q6P4I2 378 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 SYT10Q6XYQ8 523 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 RBM43Q6ZSC3 357 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 BRAPQ7Z569 592 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 MOSPD2Q8NHP6 518 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 DDX23Q9BUQ8 820 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 VAT1LQ9HCJ6 419 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZC3H7BQ9UGR2 993 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZNF215Q9UL58 517 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 POTEB3A0JP26 581 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 VWA3AA6NCI4 1184 aa6.7□□□□□ -1.34
TRAPPC13-202ENST00000399438 MC4RP32245 332 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms