RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PLEKHA5Q9HAU0 1116 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GOLGA2P5Q9HBQ8 144 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PDE11AQ9HCR9 933 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TUBGCP4Q9UGJ1 667 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MSRAQ9UJ68 235 aa13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SYCE3A1L190 88 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EPOPA6NHQ4 379 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 F8W810 466 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EXOC3O60645 756 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ERVK-21P61565 698 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PPP2R3AQ06190 1150 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TUSC3Q13454 348 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PSMD6Q15008 389 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C1orf220Q5T0J3 134 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 COLGALT1Q8NBJ5 622 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NOC3LQ8WTT2 800 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TTYH1Q9H313 450 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ASB7Q9H672 318 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KIAA1586Q9HCI6 787 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RWDD2AQ9UIY3 292 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ATG2AQ2TAZ0 1938 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 IL18RAPO95256 599 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 THP07101 528 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 GALTP07902 379 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BCAR1P56945 870 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DLG4P78352 724 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FKBP3Q00688 224 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ADAM9Q13443 819 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 STX1AQ16623 288 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CEP135Q66GS9 1140 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LMBRD2Q68DH5 695 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CD302Q8IX05 232 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CXorf38Q8TB03 319 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TSG101Q99816 390 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LRRIQ3A6PVS8 624 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 NRP1O14786 923 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PPEF2O14830 753 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MAPK13O15264 365 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EFEMP2O95967 443 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ITGB1P05556 798 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 LAG3P18627 525 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 BMPR1AP36894 532 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EPC2Q52LR7 807 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SPATA1Q5VX52 437 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PPP2R2DQ66LE6 453 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 KCNT2Q6UVM3 1135 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SLC39A11Q8N1S5 342 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ZNF516Q92618 1163 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TGS1Q96RS0 853 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 VN1R3Q9BXE9 311 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 CERS4Q9HA82 394 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 SLC28A3Q9HAS3 691 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 ANO10Q9NW15 660 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 DERAQ9Y315 318 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 C2CD2Q9Y426 696 aa13.46□□□□□ -0.25
HLA-DQB1-203ENST00000399082 TRANK1O15050 2925 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 BICDL2A1A5D9 508 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CETN3O15182 167 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SLC16A3O15427 465 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 KIF4AO95239 1232 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 LRPAP1P30533 357 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CTNNB1P35222 781 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CLCNKBP51801 687 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CLDN10P78369 228 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 C1orf127Q8N9H9 656 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CCDC127Q96BQ5 260 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms