RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 GLRA4Q5JXX5 417 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 BRSK2Q8IWQ3 736 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 ADSSL1Q8N142 457 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 SPPL3Q8TCT6 385 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 GDPD5Q8WTR4 605 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 SAAL1Q96ER3 474 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 IGSF21Q96ID5 467 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 UROC1Q96N76 676 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 FAM213AQ9BRX8 229 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 PCIF1Q9H4Z3 704 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 MARCH5Q9NX47 278 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 LMCD1Q9NZU5 365 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 DERAQ9Y315 318 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 RFXAPO00287 272 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 CYP3A5P20815 502 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 PBX3P40426 434 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 SOX4Q06945 474 aaPredicted RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 CAMK1Q14012 370 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 ADGRE1Q14246 886 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 UPP1Q16831 310 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 FOXR2Q6PJQ5 311 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 RBM43Q6ZSC3 357 aaKnown RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 TMEM173Q86WV6 379 aaPredicted RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 NT5DC4Q86YG4 428 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 RNF168Q8IYW5 571 aaPredicted RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 BCL7CQ8WUZ0 217 aaPredicted RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 ALG13Q9NP73 1137 aaKnown RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 STK39Q9UEW8 545 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 FAN1Q9Y2M0 1017 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 SCN1AP35498 2009 aa11.35□□□□□ -0.59
CYCSP55-201ENST00000399027 GOLGA8IPA6NC78 632 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 ZNF233A6NK53 670 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 GOLGA8JA6NMD2 632 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 MAPK13O15264 365 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 GRM6O15303 877 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 NR3C1P04150 777 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 DNAJB1P25685 340 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 LRPAP1P30533 357 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 OR1G1P47890 313 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 CLCNKBP51801 687 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 WNT7BP56706 349 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 KRT17Q04695 432 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 SPATA1Q5VX52 437 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 ISM2Q6H9L7 571 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 JADE1Q6IE81 842 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 DDX53Q86TM3 631 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 CBWD2Q8IUF1 395 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 ZC3H3Q8IXZ2 948 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 POF1BQ8WVV4 589 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 MYLIPQ8WY64 445 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 MRPL38Q96DV4 380 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 KIF12Q96FN5 646 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 DHTKD1Q96HY7 919 aaPredicted RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 GAS2L1Q99501 681 aaPredicted RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 PAAF1Q9BRP4 392 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 COLEC11Q9BWP8 271 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 GOLGA2P5Q9HBQ8 144 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 MTCL1Q9Y4B5 1905 aaKnown RBP11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 REV3LO60673 3130 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 PLXNA3P51805 1871 aa11.34□□□□□ -0.59
CYCSP55-201ENST00000399027 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 F8W810 466 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 BIN1O00499 593 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PSMA7O14818 248 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 FSCN2O14926 492 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 EXOC3O60645 756 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 KIF4AO95239 1232 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 NFICP08651 508 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PTMSP20962 102 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 NR2F2P24468 414 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 CCNE1P24864 410 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 RPL9P32969 192 aaKnown RBP11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 CYP2J2P51589 502 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 SPAG1Q07617 926 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 STIM1Q13586 685 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 TMEM132DQ14C87 1099 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PSMD6Q15008 389 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms