RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 HNRNPLLQ8WVV9 542 aaKnown RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 COL26A1Q96A83 441 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ADNPQ9H2P0 1102 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 EHD1Q9H4M9 534 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PLCB1Q9NQ66 1216 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 EHD2Q9NZN4 543 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ADGRG1Q9Y653 693 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 MROH5Q6ZUA9 1318 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 POTECB2RU33 542 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 APOL1O14791 398 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 HSPA6P17066 643 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 IL10P22301 178 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CNGA1P29973 690 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PTGS2P35354 604 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 HTR3AP46098 478 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PLCB3Q01970 1234 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CTDSPL2Q05D32 466 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 VAC14Q08AM6 782 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 SERINC3Q13530 473 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM209AQ5JX71 171 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 FANCBQ8NB91 859 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ESR2Q92731 530 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 KIFAP3Q92845 792 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 TIFAQ96CG3 184 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 NUP88Q99567 741 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ZNF277Q9NRM2 450 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 RMND1Q9NWS8 449 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 HPF1Q9NWY4 346 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 GTF2IRD1Q9UHL9 959 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CORO1CQ9ULV4 474 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PCDHB6Q9Y5E3 794 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 TRPM7Q96QT4 1865 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 UBXN8O00124 270 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 LIN7AO14910 233 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 AKAP10O43572 662 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PDE8AO60658 829 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 MFAP3LO75121 409 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 BMP6P22004 513 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 MAPK1P28482 360 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PHKA1P46020 1223 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ARHGDIBP52566 201 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 AP3M2P53677 418 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 OLR1P78380 273 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 GSTO1P78417 241 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ATP2B2Q01814 1243 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 HSPA14Q0VDF9 509 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 TLDC1Q6P9B6 456 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 SPOCD1Q6ZMY3 1216 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 TBC1D1Q86TI0 1168 aaPredicted RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM26EQ8N5C1 309 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 IL17RDQ8NFM7 739 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 SHC3Q92529 594 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 OTUD5Q96G74 571 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ASB16Q96NS5 453 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 FUT8Q9BYC5 575 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 GREM2Q9H772 168 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 FARSBQ9NSD9 589 aaKnown RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 PPARGC1AQ9UBK2 798 aaKnown RBP7.01□□□□□ -1.29
TM9SF4-202ENST00000398022 C9IYK1 514 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 H0Y626 953 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 MAPK13O15264 365 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 ATP5BP06576 529 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 MX2P20592 715 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 MAPKAPK2P49137 400 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 STX17P56962 302 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 BCL2A1Q16548 175 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SKIDA1Q1XH10 827 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SUPT20HL1Q3ZLR7 823 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 AADACL4Q5VUY2 407 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 KAT2BQ92831 832 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 PEX13Q92968 403 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 NXPE3Q969Y0 559 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 NLRP4Q96MN2 994 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM129AQ9BZQ8 928 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 ELAC1Q9H777 363 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 ZFYVE28Q9HCC9 887 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SDHAF3Q9NRP4 125 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM217BQ9NTX9 383 aaPredicted RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 HMGXB4Q9UGU5 601 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 L1RE1Q9UN81 338 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 A0A1B0GUL6 1792 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SGK1O00141 431 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 WDR46O15213 610 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 TLR3O15455 904 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 DLATP10515 647 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 TARSP26639 723 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 SOX6P35712 828 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 PSMC2P35998 433 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 MAPK9P45984 424 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SGCGQ13326 291 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 HABP4Q5JVS0 413 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms