RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 KCNMB3Q9NPA1 279 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 WHRNQ9P202 907 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RNF8O76064 485 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CYP11B1P15538 503 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CREB1P16220 341 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SREBF1P36956 1147 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CPA2P48052 419 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DLG4P78352 724 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SYDE1Q6ZW31 735 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CFAP36Q96G28 342 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RBM41Q96IZ5 413 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SCINQ9Y6U3 715 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NVLO15381 856 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KRT10P13645 584 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RRM1P23921 792 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MARK3P27448 753 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NOP14P78316 857 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SATB1Q01826 763 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MTMR1Q13613 665 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MTERF2Q49AM1 385 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SCARA5Q6ZMJ2 495 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ACSF2Q96CM8 615 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SMG5Q9UPR3 1016 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DDX3YO15523 660 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CBX6O95503 412 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GH1P01241 217 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GNA15P30679 374 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SHMT1P34896 483 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SPRED3Q2MJR0 410 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 H0YGN5 161 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPP1R12AO14974 1030 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LPXNO60711 386 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLITRK3O94933 977 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CALCAP01258 141 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARP10275 920 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GZMAP12544 262 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DRG2P55039 364 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 HIF1AQ16665 826 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SPDYCQ5MJ68 293 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MOXD1Q6UVY6 613 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CRELD2Q6UXH1 353 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NLRP9Q7RTR0 991 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NINJ2Q9NZG7 142 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ZFATQ9P243 1243 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NFS1Q9Y697 457 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MGRN1O60291 552 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ZWINTO95229 277 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SPATA31C1P0DKV0 1188 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KRT4P19013 534 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CHKAP35790 457 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ACAD10Q6JQN1 1059 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TOPORSQ9NS56 1045 aaPredicted RBP11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SENP1Q9P0U3 644 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PCSK1NQ9UHG2 260 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KIF1AQ12756 1690 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 IQANK1A0A1B0GTG1 560 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 COPEO14579 308 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MCF2LO15068 1137 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TOM1L1O75674 476 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 EPHB2P29323 1055 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC1A1P43005 524 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MCF2L2Q86YR7 1114 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPM1NQ8N819 430 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CKAP2Q8WWK9 683 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MYLK2Q9H1R3 596 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 METTL5Q9NRN9 209 aaKnown RBP11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 COG5Q9UP83 839 aa11.77□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CASZ1Q86V15 1759 aa11.77□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
CSGALNACT1-202ENST00000397998 VCAM1P19320 739 aa11.77□□□□□ -0.53
CSGALNACT1-202ENST00000397998 YWHABP31946 246 aaKnown RBP11.77□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PGM1P36871 562 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 356.3 ms