RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TM9SF2Q99805 663 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 C16orf70Q9BSU1 422 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 SARGQ9BW04 601 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 NT5C3AQ9H0P0 336 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 FAM124BQ9H5Z6 455 aaPredicted RBP4.19□□□□□ -1.74
UBE3A-202ENST00000397954 TRIM39Q9HCM9 518 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 AAASQ9NRG9 546 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.19□□□□□ -1.74
UBE3A-202ENST00000397954 DPP7Q9UHL4 492 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 COG5Q9UP83 839 aa4.19□□□□□ -1.74
UBE3A-202ENST00000397954 DENND4AQ7Z401 1863 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 UBE4BO95155 1302 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 IGKV6-21A0A0C4DH24 114 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TCEA3O75764 348 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 HTR3BO95264 441 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 GGPS1O95749 300 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 EOMESO95936 686 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 FGBP02675 491 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MYL3P08590 195 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 SRGAP2BP0DMP2 458 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 DNM2P50570 870 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 CRYBB1P53674 252 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 NLRP5P59047 1200 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PSMC5P62195 406 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 FNDC3BQ53EP0 1204 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TIGD5Q53EQ6 642 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 COBLL1Q53SF7 1204 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 RNF219Q5W0B1 726 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 LRRC8DQ7L1W4 858 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 HEATR3Q7Z4Q2 680 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MICU3Q86XE3 530 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 FBXO16Q8IX29 292 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 ANKRD42Q8N9B4 389 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MCPH1Q8NEM0 835 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TMEM40Q8WWA1 233 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 BRF1Q92994 677 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PPP2R3CQ969Q6 453 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 KLF16Q9BXK1 252 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 UBE2OQ9C0C9 1292 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 SENP6Q9GZR1 1112 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 HIPK3Q9H422 1215 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 DACT1Q9NYF0 836 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 CGNQ9P2M7 1197 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PUF60Q9UHX1 559 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MYH11P35749 1972 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 A0A1W2PNR3 127 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 ARHGEF37A1IGU5 675 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PSMD10O75832 226 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PGK2P07205 417 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 IQCF3P0C7M6 154 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 JMJD7P0C870 316 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PPM1AP35813 382 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 SLC16A2P36021 539 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 DGKGP49619 791 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PPP2R2AP63151 447 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MRPS9P82933 396 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 CNTN2Q02246 1040 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MORC3Q14149 939 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 IKBKEQ14164 716 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PTGISQ16647 500 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TRIM60Q495X7 471 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 ZNF697Q5TEC3 545 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 RAB44Q7Z6P3 723 aaPredicted RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 PLA2G4DQ86XP0 818 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 CLEC10AQ8IUN9 316 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 C7orf61Q8IZ16 206 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 KIAA1958Q8N8K9 716 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 CEP120Q8N960 986 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TNFRSF25Q93038 417 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 FERMT2Q96AC1 680 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 MAP7D2Q96T17 732 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 IL25Q9H293 177 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 FBRSQ9HAH7 460 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 GPAMQ9HCL2 828 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 ZNF302Q9NR11 478 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 COL20A1Q9P218 1284 aa4.18□□□□□ -1.74
UBE3A-202ENST00000397954 ISY1Q9ULR0 285 aaKnown RBP4.18□□□□□ -1.74
UBE3A-202ENST00000397954 TRBV23-1A0A0A0MS06 115 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 DYTNA2CJ06 578 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 H0YGN5 161 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 IPO5O00410 1097 aaKnown RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 DYNC1LI2O43237 492 aaPredicted RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 ATE1O95260 518 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 PLEKHA8P1O95397 391 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 RARAP10276 462 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 PF4V1P10720 104 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 CTSOP43234 321 aaPredicted RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 MAGEA10P43363 369 aaPredicted RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 KCNJ6P48051 423 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 POLGP54098 1239 aaPredicted RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 MRPS6P82932 125 aaKnown RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 RPL6Q02878 288 aaKnown RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 TLE2Q04725 743 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 HLTFQ14527 1009 aaKnown RBP eCLIP4.17□□□□□ -1.742e-6■■■□□ 14.6
UBE3A-202ENST00000397954 USH1GQ495M9 461 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 SV2CQ496J9 727 aa4.17□□□□□ -1.74
UBE3A-202ENST00000397954 EPM2AIP1Q7L775 607 aaPredicted RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 SPATS2Q86XZ4 545 aaKnown RBP4.17□□□□□ -1.74
UBE3A-202ENST00000397954 CBARPQ8N350 705 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms