RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 TRAPPC9Q96Q05 1148 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 UBE4BO95155 1302 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 K7ENM7 598 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 SPOPO43791 374 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 SGPL1O95470 568 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 CCNB1P14635 433 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 COILP38432 576 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 HADHBP55084 474 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 LONRF1Q17RB8 773 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 RBM12BQ8IXT5 1001 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 KIFAP3Q92845 792 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 NKX1-2Q9UD57 310 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 PRR12Q9ULL5 1215 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 PFASO15067 1338 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 DDX39AO00148 427 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 GJB6O95452 261 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 GH2P01242 217 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 MAGEA8P43361 318 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 RAD23BP54727 409 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 HHATQ5VTY9 493 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 ZSWIM2Q8NEG5 633 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 UNC45AQ9H3U1 944 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 ARL2BPQ9Y2Y0 163 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 A0A1B0GVG6 124 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 ARHGEF35A5YM69 484 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 ACSL3O95573 720 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 ALAS1P13196 640 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 CNGA2Q16280 664 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 AOC3Q16853 763 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 SLC13A5Q86YT5 568 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 DYDC1Q8WWB3 177 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 SLC5A5Q92911 643 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 LXNQ9BS40 222 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 PKD2L1Q9P0L9 805 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
CHMP1A-201ENST00000397901 RARGP13631 454 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 VAMP7P51809 220 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 NCAPG2Q86XI2 1143 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 DAW1Q8N136 415 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 CBWD1Q9BRT8 395 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 TAOK3Q9H2K8 898 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 PCMTD2Q9NV79 361 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 MTUS1Q9ULD2 1270 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 FOXO6A8MYZ6 492 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 ARP10275 920 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 DLATP10515 647 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 CREB1P16220 341 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 CHRNB2P17787 502 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 RFX1P22670 979 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 RXRBP28702 533 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 POLE2P56282 527 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 EXOC3L1Q86VI1 746 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 ZNF564Q8TBZ8 553 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 ART4Q93070 314 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 ZNF577Q9BSK1 485 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 NUP85Q9BW27 656 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 ZCWPW1Q9H0M4 648 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 TRIM33Q9UPN9 1127 aa17.03■□□□□ 0.32
CHMP1A-201ENST00000397901 PIK3CDO00329 1044 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 CETN1Q12798 172 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 PARP6Q2NL67 630 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 IRGCQ6NXR0 463 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 C1orf54Q8WWF1 131 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 WNT8AQ9H1J5 351 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 DLGAP2Q9P1A6 1054 aa17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 ZMYND8Q9ULU4 1186 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-201ENST00000397901 CYP26A1O43174 497 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 GGPS1O95749 300 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 GSTA2P09210 222 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 TPBGLP0DKB5 382 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 SIX1Q15475 284 aaPredicted RBP17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 TAOK1Q7L7X3 1001 aa17.02■□□□□ 0.31
CHMP1A-201ENST00000397901 SLC47A2Q86VL8 602 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms