RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 WNT7AO00755 349 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 ECI2O75521 394 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
CUX2-202ENST00000397643 TDGF1P13385 188 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 PDXDC1Q6P996 788 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 GPR161Q8N6U8 529 aaKnown RBP17.79■□□□□ 0.44
CUX2-202ENST00000397643 BSNDQ8WZ55 320 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 PARD6AQ9NPB6 346 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 HEBP1Q9NRV9 189 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 USP20Q9Y2K6 914 aa17.79■□□□□ 0.44
CUX2-202ENST00000397643 CDKL5O76039 1030 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 CTDNEP1O95476 244 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 RHOP08100 348 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 FCARP24071 287 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 RTL10Q7L3V2 364 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 MAEAQ7L5Y9 396 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 NELL2Q99435 816 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 CCDC113Q9H0I3 377 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 TTC12Q9H892 705 aaPredicted RBP17.78■□□□□ 0.44
CUX2-202ENST00000397643 AVENQ9NQS1 362 aaPredicted RBP17.78■□□□□ 0.44
CUX2-202ENST00000397643 GDE1Q9NZC3 331 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 MRPS23Q9Y3D9 190 aaKnown RBP17.78■□□□□ 0.44
CUX2-202ENST00000397643 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
CUX2-202ENST00000397643 NRG2O14511 850 aaPredicted RBP17.77■□□□□ 0.44
CUX2-202ENST00000397643 N4BP3O15049 544 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 SPATA31C1P0DKV0 1188 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
CUX2-202ENST00000397643 CEBPBP17676 345 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 XBP1P17861 261 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 SDHBP21912 280 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 LMNB2Q03252 620 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 MTAPQ13126 283 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 CALCRLQ16602 461 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 EEF1DP3Q658K8 133 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 TANGO2Q6ICL3 276 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 ZNF852Q6ZMS4 543 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 NOSTRINQ8IVI9 506 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 MCRS1Q96EZ8 462 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
CUX2-202ENST00000397643 CCDC43Q96MW1 224 aaKnown RBP17.77■□□□□ 0.44
CUX2-202ENST00000397643 PPP1R10Q96QC0 940 aaKnown RBP17.77■□□□□ 0.44
CUX2-202ENST00000397643 MTMR9Q96QG7 549 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 BACE2Q9Y5Z0 518 aa17.77■□□□□ 0.44
CUX2-202ENST00000397643 PRR5-ARHGAP8B1AHC4 643 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
CUX2-202ENST00000397643 ARHGAP8P85298 464 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 ADCY1Q08828 1119 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 ZBTB8OSQ8IWT0 167 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 C3orf58Q8NDZ4 430 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 ELSPBP1Q96BH3 223 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
CUX2-202ENST00000397643 CDV3Q9UKY7 258 aaKnown RBP17.76■□□□□ 0.43
CUX2-202ENST00000397643 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 ARHGEF37A1IGU5 675 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 ACKR2O00590 384 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 NCAM2O15394 837 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 TBC1D4O60343 1298 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 PFKFB2O60825 505 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 B3GAT3O94766 335 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
CUX2-202ENST00000397643 KRT2P35908 639 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 CLCNKBP51801 687 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 PRPF4BQ13523 1007 aaKnown RBP17.75■□□□□ 0.43
CUX2-202ENST00000397643 RABEP1Q15276 862 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 UPP1Q16831 310 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 PRSS36Q5K4E3 855 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 DNASE1L2Q92874 299 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 SECISBP2LQ93073 1101 aaKnown RBP17.75■□□□□ 0.43
CUX2-202ENST00000397643 KIF2CQ99661 725 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 FAM126AQ9BYI3 521 aaPredicted RBP17.75■□□□□ 0.43
CUX2-202ENST00000397643 CHRDQ9H2X0 955 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 GDAQ9Y2T3 454 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 USP24Q9UPU5 2620 aa17.75■□□□□ 0.43
CUX2-202ENST00000397643 DCDC2BA2VCK2 349 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 I3L4J1 428 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 NEMFO60524 1076 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 PRKCBP05771 671 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 TXKP42681 527 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 NEK4P51957 841 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 ROR1Q01973 937 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 MAPK6Q16659 721 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 SLC8B1Q6J4K2 584 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 MAMSTRQ6ZN01 415 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 RTKNQ9BST9 563 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 C2orf40Q9H1Z8 148 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 GOLGA2P5Q9HBQ8 144 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 ORC3Q9UBD5 711 aaPredicted RBP17.74■□□□□ 0.43
CUX2-202ENST00000397643 USP18Q9UMW8 372 aa17.74■□□□□ 0.43
CUX2-202ENST00000397643 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
CUX2-202ENST00000397643 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 MED24O75448 989 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 ABLIM3O94929 683 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 CCR2P41597 374 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms