RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 FSCN2O14926 492 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ADSSP30520 456 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 HSPA9P38646 679 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PIGHQ14442 188 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF571Q7Z3V5 609 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 LIMS2Q7Z4I7 341 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 HSFY1Q96LI6 401 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 RASSF4Q9H2L5 321 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 TRPC6Q9Y210 931 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 DRG1Q9Y295 367 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 TBC1D8O95759 1140 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ERCC3P19447 782 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF268Q14587 947 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 UBR7Q8N806 425 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PPP1R2P1Q96PQ5 205 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ROPN1BQ9BZX4 212 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZHX3Q9H4I2 956 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ROPN1Q9HAT0 212 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 GBA2Q9HCG7 927 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PNPLA8Q9NP80 782 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ASNSD1Q9NWL6 643 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 EIF3HO15372 352 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF623O75123 536 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ATF7P17544 494 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 RWDD2BP57060 319 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ELF2Q15723 593 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ARHGAP17Q68EM7 881 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 TRMT10CQ7L0Y3 403 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 KATNAL2Q8IYT4 538 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 C2orf69Q8N8R5 385 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ACRBPQ8NEB7 543 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PIGOQ8TEQ8 1089 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZSWIM1Q9BR11 485 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 IRX2Q9BZI1 471 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 DDX56Q9NY93 547 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CWC15Q9P013 229 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ATP9AO75110 1047 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CYP11B1P15538 503 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 NMT1P30419 496 aaKnown RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TAZQ16635 292 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 BOLA3Q53S33 107 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF560Q96MR9 790 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CAPN6Q9Y6Q1 641 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SLC9A1P19634 815 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PEX3P56589 373 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 MTF1Q14872 753 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF792Q3KQV3 632 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TRPM4Q8TD43 1214 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 GLIS2Q9BZE0 524 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 RBAKQ9NYW8 714 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 KBTBD13C9JR72 458 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 RAB27AP51159 221 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PLS1Q14651 629 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 RHOT1Q8IXI2 618 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SMCR8Q8TEV9 937 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 MLXIPQ9HAP2 919 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 NLRC4Q9NPP4 1024 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 RNF181Q9P0P0 153 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 GTF2IRD1Q9UHL9 959 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PCDHA3Q9Y5H8 950 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SF3B1O75533 1304 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 A0A1B0GUA9 196 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 INPPL1O15357 1258 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CD4P01730 458 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 UNGP13051 313 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 GLRA2P23416 452 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CTNNA1P35221 906 aaKnown RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CYS1Q717R9 158 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SCML4Q8N228 414 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CPLX3Q8WVH0 158 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SLC38A7Q9NVC3 462 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 RAD54BQ9Y620 910 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TRIP11Q15643 1979 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 A0A087WWV3 80 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 ABLIM1O14639 778 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PROSCO94903 275 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TNNC2P02585 160 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PPP3CAQ08209 521 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CUL2Q13617 745 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CNGA2Q16280 664 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 C1orf220Q5T0J3 134 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CAGE1Q8TC20 777 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 LRRC39Q96DD0 335 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TTC25Q96NG3 672 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CBWD1Q9BRT8 395 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 BRD8Q9H0E9 1235 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 POLR3FQ9H1D9 316 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SPC25Q9HBM1 224 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SHOC2Q9UQ13 582 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 PASKQ96RG2 1323 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 HAS3O00219 553 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms