RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SMIM28A0A1B0GU29 152 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 K7ERI5 159 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 ABLIM3O94929 683 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 PFKPQ01813 784 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 PDIA5Q14554 519 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 MLF2Q15773 248 aaPredicted RBP13.13□□□□□ -0.31
SYNE4-203ENST00000397428 ECM1Q16610 540 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
SYNE4-203ENST00000397428 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 NPAS3Q8IXF0 933 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 RUBCNQ92622 972 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
SYNE4-203ENST00000397428 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
SYNE4-203ENST00000397428 GDE1Q9NZC3 331 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 TNFSF13BQ9Y275 285 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 CDY1Q9Y6F8 540 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 ECI2O75521 394 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 PTPN2P17706 415 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 LIG1P18858 919 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 TKTP29401 623 aaKnown RBP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 GRM5P41594 1212 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 FOSBP53539 338 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 SOX4Q06945 474 aaPredicted RBP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 FZD5Q13467 585 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 MRPL58Q14197 206 aaKnown RBP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 SLC8B1Q6J4K2 584 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 C3orf58Q8NDZ4 430 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 NELL1Q92832 810 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 ACO2Q99798 780 aaKnown RBP13.12□□□□□ -0.31
SYNE4-203ENST00000397428 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 PLA2G2FQ9BZM2 168 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 TMEM134Q9H6X4 195 aa13.12□□□□□ -0.31
SYNE4-203ENST00000397428 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 MICAL2O94851 1124 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 ATF2P15336 505 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 KCNE1P15382 129 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 SLC5A9Q2M3M2 681 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
SYNE4-203ENST00000397428 TCEAL8Q8IYN2 117 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 FBXO18Q8NFZ0 1043 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
SYNE4-203ENST00000397428 KIFC3Q9BVG8 833 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 LTB4R2Q9NPC1 389 aa13.11□□□□□ -0.31
SYNE4-203ENST00000397428 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
SYNE4-203ENST00000397428 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
SYNE4-203ENST00000397428 DMDP11532 3685 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 COL4A3Q01955 1670 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 I3L4J1 428 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 RHOP08100 348 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 CD72P21854 359 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 RPL9P32969 192 aaKnown RBP13.1□□□□□ -0.31
SYNE4-203ENST00000397428 CCT6AP40227 531 aaKnown RBP13.1□□□□□ -0.31
SYNE4-203ENST00000397428 MAGEA9P43362 315 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 BRCC3P46736 316 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 RPS9P46781 194 aaKnown RBP13.1□□□□□ -0.31
SYNE4-203ENST00000397428 NPTX2P47972 431 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 UBXN2BQ14CS0 331 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 ZBTB44Q8NCP5 570 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
SYNE4-203ENST00000397428 LLPHQ9BRT6 129 aaKnown RBP13.1□□□□□ -0.31
SYNE4-203ENST00000397428 CDT1Q9H211 546 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 LRWD1Q9UFC0 647 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 KIAA1024Q9UPX6 916 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 TRIP11Q15643 1979 aa13.1□□□□□ -0.31
SYNE4-203ENST00000397428 ABLIM1O14639 778 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms