RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 DHX38Q92620 1227 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 ERVK-5Q9HDB9 667 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 C1orf112Q9NSG2 853 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 RALGAPA2Q2PPJ7 1873 aa20.53■□□□□ 0.88
TSPAN4-204ENST00000397404 GOLGA6L9A6NEM1 432 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 DCDC2CA8MYV0 355 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 ZNF623O75123 536 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 IPO7O95373 1038 aaKnown RBP20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 CXCL8P10145 99 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 SELPP16109 830 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 FERP16591 822 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 CYLC1P35663 651 aaPredicted RBP20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 PIK3CAP42336 1068 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 JAM2P57087 298 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 SGSM1Q2NKQ1 1148 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 TMEM139Q8IV31 216 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 PPP1R13LQ8WUF5 828 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 POP1Q99575 1024 aaKnown RBP20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 CNTN3Q9P232 1028 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.88
TSPAN4-204ENST00000397404 CITO14578 2027 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 LRRC53A6NM62 1247 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 ZSCAN12O43309 604 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 GFPT2O94808 682 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 STAU1O95793 577 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 SERPING1P05155 500 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 CTSHP09668 335 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 COL6A1P12109 1028 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 LRMPQ12912 555 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TRPC3Q13507 836 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TMEM132DQ14C87 1099 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 SLC10A6Q3KNW5 377 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 XKR4Q5GH76 650 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 ZNF618Q5T7W0 954 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TDRD10Q5VZ19 366 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 SLC39A5Q6ZMH5 540 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 VPS36Q86VN1 386 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 KIAA1524Q8TCG1 905 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TAS1R2Q8TE23 839 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 ZNF516Q92618 1163 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 APBB2Q92870 758 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 WNT8BQ93098 351 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 SNX27Q96L92 541 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TMEM106CQ9BVX2 250 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 TRPV6Q9H1D0 765 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 VRTNQ9H8Y1 702 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 PADI3Q9ULW8 664 aa20.51■□□□□ 0.87
TSPAN4-204ENST00000397404 LACTBL1A8MY62 500 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 EPHB6O15197 1021 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 HLA-DRAP01903 254 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 P4HA1P13674 534 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 CYP3A5P20815 502 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 FGFR4P22455 802 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 PRKCIP41743 596 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 NCOA4Q13772 614 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 LPIN1Q14693 890 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 ALKAL1Q6UXT8 129 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 TTC39CQ8N584 583 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 CEP120Q8N960 986 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 FAM212AQ96EL1 285 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 LUC7LQ9NQ29 371 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 DNAJC12Q9UKB3 198 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 FHOD1Q9Y613 1164 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 ACTN1P12814 892 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 KCNE1P15382 129 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 OSTNP61366 133 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 YWHAEP62258 255 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 TFAMQ00059 246 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 NFX1Q12986 1120 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 UBXN11Q5T124 520 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 IQCEQ6IPM2 695 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 LRRC8DQ7L1W4 858 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 MRPL10Q7Z7H8 261 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 ZNF830Q96NB3 372 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 UBE2TQ9NPD8 197 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 NLRC4Q9NPP4 1024 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 FAM105AQ9NUU6 356 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 SLC38A7Q9NVC3 462 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 UBQLN1Q9UMX0 589 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 GIT1Q9Y2X7 761 aa20.5■□□□□ 0.87
TSPAN4-204ENST00000397404 F8VZ95 297 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 RNF225M0QZC1 329 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 ASS1P00966 412 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 TUBB4AP04350 444 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 PAX3P23760 479 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 SOX5P35711 763 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 KRT83P78385 493 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 RAPGEF1Q13905 1077 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 ASIC2Q16515 512 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 SEZ6Q53EL9 994 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 PHLDB3Q6NSJ2 640 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 WDR59Q6PJI9 974 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 BEST2Q8NFU1 509 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 CCDC42Q96M95 316 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 EIF2AQ9BY44 585 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms