RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SH3GLB2Q9NR46 395 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 C2orf42Q9NWW7 574 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 MIOSQ9NXC5 875 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 GDE1Q9NZC3 331 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-203ENST00000397378 IPPQ9Y573 584 aa10.49□□□□□ -0.73
NEDD9-203ENST00000397378 FREM2Q5SZK8 3169 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 LAMA5O15230 3695 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 ERLIN2O94905 339 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 MLH1P40692 756 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 RFC5P40937 340 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 QARSP47897 775 aaKnown RBP10.48□□□□□ -0.73
NEDD9-203ENST00000397378 SCNN1GP51170 649 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 NPEPPSP55786 919 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 FGD1P98174 961 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 CREB5Q02930 508 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 C19orf57Q0VDD7 668 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 LAMTOR4Q0VGL1 99 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 TCP11Q8WWU5 503 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
NEDD9-203ENST00000397378 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 ADAM28Q9UKQ2 775 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
NEDD9-203ENST00000397378 LNP1A1A4G5 178 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 TDP2O95551 362 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CAVIN2O95810 425 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 P4HBP07237 508 aaKnown RBP10.47□□□□□ -0.73
NEDD9-203ENST00000397378 RHOP08100 348 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 IFNAR1P17181 557 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CEBPBP17676 345 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 PSMC3P17980 439 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 FCARP24071 287 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 HOXA6P31267 233 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 PTENP60484 403 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 SLC5A9Q2M3M2 681 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 UAP1L1Q3KQV9 507 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 RTP2Q5QGT7 225 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-203ENST00000397378 FERMT3Q86UX7 667 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CEP57Q86XR8 500 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-203ENST00000397378 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 FBXL16Q8N461 479 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
NEDD9-203ENST00000397378 RNF149Q8NC42 400 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CSGALNACT1Q8TDX6 532 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 TMEM143Q96AN5 459 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 CSRNP2Q9H175 543 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 TMEM9BQ9NQ34 198 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 TRPV5Q9NQA5 729 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
NEDD9-203ENST00000397378 HELZ2Q9BYK8 2649 aaKnown RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 M0R2N6 131 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 EML1O00423 815 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 ZNF263O14978 683 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 TSPAN1O60635 241 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 TADA2AO75478 443 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 POU2F2P09086 479 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 KPNA1P52294 538 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 NLRP5P59047 1200 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 POU5F1BQ06416 359 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 GRIK3Q13003 919 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 PSMD5Q16401 504 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 FAM78AQ5JUQ0 283 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 DGKKQ5KSL6 1271 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 POTEHQ6S545 545 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 VITQ6UXI7 678 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 Q6ZUG5 572 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 HNRNPLLQ8WVV9 542 aaKnown RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 BRF1Q92994 677 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 LRIG1Q96JA1 1093 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 FAM20AQ96MK3 541 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 CLSTN3Q9BQT9 956 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 APOL6Q9BWW8 343 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 SLC26A6Q9BXS9 759 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 HES2Q9Y543 173 aa10.46□□□□□ -0.73
NEDD9-203ENST00000397378 SF3B1O75533 1304 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD9-203ENST00000397378 EML5Q05BV3 1969 aa10.46□□□□□ -0.74
NEDD9-203ENST00000397378 SLC38A8A6NNN8 435 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 EXTL3O43909 919 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 EMC2Q15006 297 aa10.45□□□□□ -0.74
NEDD9-203ENST00000397378 ELF2Q15723 593 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms