RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RXFP1Q9HBX9 757 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 CNTN3Q9P232 1028 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 DPP7Q9UHL4 492 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 A0A087X0B3 334 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 C1RP00736 705 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
SEC13-208ENST00000397109 ME1P48163 572 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 UBE2HP62256 183 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 AMPD3Q01432 767 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 ELMSAN1Q6PJG2 1045 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 ZNF720Q7Z2F6 126 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 MAP4K3Q8IVH8 894 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 IQUBQ8NA54 791 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 FNIP2Q9P278 1114 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 CACNG4Q9UBN1 327 aa15.89■□□□□ 0.13
SEC13-208ENST00000397109 OGTO15294 1046 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 B3GAT3O94766 335 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 KIF4AO95239 1232 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 IDEP14735 1019 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 EPCAMP16422 314 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 CLCN4P51793 760 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 SLFN12LQ6IEE8 588 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 PDXDC1Q6P996 788 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 SHC4Q6S5L8 630 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 FBXL18Q96ME1 805 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 TSPAN18Q96SJ8 248 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 TTPALQ9BTX7 342 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 PHF7Q9BWX1 381 aaPredicted RBP15.88■□□□□ 0.13
SEC13-208ENST00000397109 ADAM7Q9H2U9 754 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
SEC13-208ENST00000397109 FAM13BQ9NYF5 915 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 PCDHA7Q9UN72 937 aa15.88■□□□□ 0.13
SEC13-208ENST00000397109 GOLGA6L3A6NEY3 463 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 TEX28O15482 410 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
SEC13-208ENST00000397109 CLCNKBP51801 687 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 ZNF445P59923 1031 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 ALCAMQ13740 583 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 UPP1Q16831 310 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 SLC10A6Q3KNW5 377 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 HERC4Q5GLZ8 1057 aaPredicted RBP15.87■□□□□ 0.13
SEC13-208ENST00000397109 FAM171A1Q5VUB5 890 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 CCDC65Q8IXS2 484 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 RIN2Q8WYP3 895 aaPredicted RBP15.87■□□□□ 0.13
SEC13-208ENST00000397109 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
SEC13-208ENST00000397109 NECTIN4Q96NY8 510 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 PYM1Q9BRP8 204 aaKnown RBP15.87■□□□□ 0.13
SEC13-208ENST00000397109 HAPLN2Q9GZV7 340 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 MAGEF1Q9HAY2 307 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 CD320Q9NPF0 282 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 OLFML3Q9NRN5 406 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 PANK4Q9NVE7 773 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 EXOC7Q9UPT5 735 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 PCDHB13Q9Y5F0 798 aa15.87■□□□□ 0.13
SEC13-208ENST00000397109 A0A0B4J269 797 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 LETM1O95202 739 aaPredicted RBP15.86■□□□□ 0.13
SEC13-208ENST00000397109 MTHFRP42898 656 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 CBX2Q14781 532 aaPredicted RBP15.86■□□□□ 0.13
SEC13-208ENST00000397109 POSTNQ15063 836 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 E2F4Q16254 413 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 SEZ6Q53EL9 994 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
SEC13-208ENST00000397109 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.86■□□□□ 0.13
SEC13-208ENST00000397109 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 PIK3R5Q8WYR1 880 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 DHX58Q96C10 678 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 RIPOR3Q96MK2 946 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 APOL5Q9BWW9 433 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 SFXN1Q9H9B4 322 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 RPF1Q9H9Y2 349 aaKnown RBP15.86■□□□□ 0.13
SEC13-208ENST00000397109 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
SEC13-208ENST00000397109 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 TTC26A0AVF1 554 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 XPOTO43592 962 aaKnown RBP15.85■□□□□ 0.13
SEC13-208ENST00000397109 PPP1R37O75864 691 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 GLUD1P00367 558 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 CXCL8P10145 99 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 PPP2R3AQ06190 1150 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 ATAT1Q5SQI0 421 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 RARS2Q5T160 578 aaKnown RBP15.85■□□□□ 0.13
SEC13-208ENST00000397109 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 CD302Q8IX05 232 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 GPT2Q8TD30 523 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 ACCSQ96QU6 501 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 STRA6Q9BX79 667 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 GOLGA2P5Q9HBQ8 144 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms