RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 LPAL2Q16609 132 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 POTEHQ6S545 545 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 CCDC43Q96MW1 224 aaKnown RBP16.55■□□□□ 0.24
SEC13-206ENST00000397102 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
SEC13-206ENST00000397102 SNTG2Q9NY99 539 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 BACE2Q9Y5Z0 518 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 ZFHX4Q86UP3 3567 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 F5P12259 2224 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.54■□□□□ 0.24
SEC13-206ENST00000397102 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 N4BP3O15049 544 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 RECQL4O94761 1208 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 CEBPBP17676 345 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 PTPN2P17706 415 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 FCARP24071 287 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 RARRES1P49788 294 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 FAM187BQ17R55 369 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
SEC13-206ENST00000397102 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 CHAMP1Q96JM3 812 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 HSD17B14Q9BPX1 270 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 FZD8Q9H461 694 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 BRD9Q9H8M2 597 aa16.54■□□□□ 0.24
SEC13-206ENST00000397102 ARHGEF37A1IGU5 675 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 LRG1P02750 347 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 RBM25P49756 843 aaKnown RBP16.53■□□□□ 0.24
SEC13-206ENST00000397102 GRM2Q14416 872 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 PRSS36Q5K4E3 855 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 CDCA2Q69YH5 1023 aaPredicted RBP16.53■□□□□ 0.24
SEC13-206ENST00000397102 PRR23CQ6ZRP0 262 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 PRR23BQ6ZRT6 265 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 ANKS3Q6ZW76 656 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 FAM3CQ92520 227 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 IRF7Q92985 503 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
SEC13-206ENST00000397102 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
SEC13-206ENST00000397102 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
SEC13-206ENST00000397102 CXCL16Q9H2A7 254 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 PDZD7Q9H5P4 517 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 ZFP14Q9HCL3 533 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 TRPV5Q9NQA5 729 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 SEMA4GQ9NTN9 838 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 TRIP11Q15643 1979 aa16.53■□□□□ 0.24
SEC13-206ENST00000397102 CHD8Q9HCK8 2581 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 USO1O60763 962 aaKnown RBP16.52■□□□□ 0.24
SEC13-206ENST00000397102 B3GAT3O94766 335 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 CSRP2Q16527 193 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 MAP4K3Q8IVH8 894 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 ZNF461Q8TAF7 563 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 ADPGKQ9BRR6 497 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 LMAN1LQ9HAT1 526 aa16.52■□□□□ 0.24
SEC13-206ENST00000397102 ZNF334Q9HCZ1 680 aaPredicted RBP16.52■□□□□ 0.24
SEC13-206ENST00000397102 USP24Q9UPU5 2620 aa16.52■□□□□ 0.23
SEC13-206ENST00000397102 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.23
SEC13-206ENST00000397102 TTLL13PA6NNM8 815 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 ZNF197O14709 1029 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 TRAPPC3O43617 180 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
SEC13-206ENST00000397102 MICAL2O94851 1124 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 XBP1P17861 261 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
SEC13-206ENST00000397102 CXCL12P48061 93 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 ROR1Q01973 937 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 SIM2Q14190 667 aaPredicted RBP16.51■□□□□ 0.23
SEC13-206ENST00000397102 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 DDX1Q92499 740 aaKnown RBP16.51■□□□□ 0.23
SEC13-206ENST00000397102 UROC1Q96N76 676 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 ASB16Q96NS5 453 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 CORO1BQ9BR76 489 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 C2orf40Q9H1Z8 148 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 GPRC5CQ9NQ84 441 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
SEC13-206ENST00000397102 ABLIM3O94929 683 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
SEC13-206ENST00000397102 PSMC3P17980 439 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 IGFBP6P24592 240 aaPredicted RBP16.5■□□□□ 0.23
SEC13-206ENST00000397102 ELF1P32519 619 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 CNR2P34972 360 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 CLCNKBP51801 687 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 SATB1Q01826 763 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
SEC13-206ENST00000397102 MAPK6Q16659 721 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 EARS2Q5JPH6 523 aaKnown RBP16.5■□□□□ 0.23
SEC13-206ENST00000397102 CD300LGQ6UXG3 332 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 MAEAQ7L5Y9 396 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.5■□□□□ 0.23
SEC13-206ENST00000397102 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 PIGOQ8TEQ8 1089 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 DEPDC1BQ8WUY9 529 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 TCEAL4Q96EI5 215 aa16.5■□□□□ 0.23
SEC13-206ENST00000397102 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
SEC13-206ENST00000397102 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms