RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
SEC13-205ENST00000397101 FGF14Q92915 247 aa15.04■□□□□ -0
SEC13-205ENST00000397101 EPSTI1Q96J88 318 aa15.04■□□□□ -0
SEC13-205ENST00000397101 GAD1Q99259 594 aa15.04■□□□□ -0
SEC13-205ENST00000397101 EPC1Q9H2F5 836 aa15.04■□□□□ -0
SEC13-205ENST00000397101 NCDNQ9UBB6 729 aa15.04■□□□□ -0
SEC13-205ENST00000397101 VAV3Q9UKW4 847 aa15.04■□□□□ -0
SEC13-205ENST00000397101 LILRB5O75023 590 aa15.03■□□□□ -0
SEC13-205ENST00000397101 PFKFB1P16118 471 aa15.03■□□□□ -0
SEC13-205ENST00000397101 SYKP43405 635 aa15.03■□□□□ -0
SEC13-205ENST00000397101 POU5F1BQ06416 359 aa15.03■□□□□ -0
SEC13-205ENST00000397101 LAMTOR4Q0VGL1 99 aa15.03■□□□□ -0
SEC13-205ENST00000397101 PPP2R5CQ13362 524 aa15.03■□□□□ -0
SEC13-205ENST00000397101 EPHA7Q15375 998 aa15.03■□□□□ -0
SEC13-205ENST00000397101 PLA2G4FQ68DD2 849 aa15.03■□□□□ -0
SEC13-205ENST00000397101 PALB2Q86YC2 1186 aa15.03■□□□□ -0
SEC13-205ENST00000397101 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
SEC13-205ENST00000397101 HACE1Q8IYU2 909 aa15.03■□□□□ -0
SEC13-205ENST00000397101 ATRIPQ8WXE1 791 aa15.03■□□□□ -0
SEC13-205ENST00000397101 CEP170P1Q96L14 293 aa15.03■□□□□ -0
SEC13-205ENST00000397101 NELL2Q99435 816 aa15.03■□□□□ -0
SEC13-205ENST00000397101 PLIN2Q99541 437 aa15.03■□□□□ -0
SEC13-205ENST00000397101 RTKNQ9BST9 563 aa15.03■□□□□ -0
SEC13-205ENST00000397101 FAM126AQ9BYI3 521 aaPredicted RBP15.03■□□□□ -0
SEC13-205ENST00000397101 SPATA6Q9NWH7 488 aaPredicted RBP15.03■□□□□ -0
SEC13-205ENST00000397101 ZSCAN32Q9NX65 697 aa15.03■□□□□ -0
SEC13-205ENST00000397101 MIOSQ9NXC5 875 aa15.03■□□□□ -0
SEC13-205ENST00000397101 FBXW11Q9UKB1 542 aa15.03■□□□□ -0
SEC13-205ENST00000397101 KCNH3Q9ULD8 1083 aa15.03■□□□□ -0
SEC13-205ENST00000397101 EML1O00423 815 aa15.02■□□□□ -0
SEC13-205ENST00000397101 TBC1D4O60343 1298 aa15.02■□□□□ -0
SEC13-205ENST00000397101 KRT37O76014 449 aa15.02■□□□□ -0
SEC13-205ENST00000397101 ERLIN2O94905 339 aa15.02■□□□□ -0
SEC13-205ENST00000397101 P4HBP07237 508 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 SPATA31D3P0C874 917 aa15.02■□□□□ -0
SEC13-205ENST00000397101 SRGAP2CP0DJJ0 459 aa15.02■□□□□ -0
SEC13-205ENST00000397101 MLH1P40692 756 aa15.02■□□□□ -0
SEC13-205ENST00000397101 SCNN1GP51170 649 aa15.02■□□□□ -0
SEC13-205ENST00000397101 NPEPPSP55786 919 aa15.02■□□□□ -0
SEC13-205ENST00000397101 PTENP60484 403 aa15.02■□□□□ -0
SEC13-205ENST00000397101 CYP4A11Q02928 519 aa15.02■□□□□ -0
SEC13-205ENST00000397101 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 KARSQ15046 597 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 SKOR2Q2VWA4 1001 aaPredicted RBP15.02■□□□□ -0
SEC13-205ENST00000397101 SLC44A4Q53GD3 710 aa15.02■□□□□ -0
SEC13-205ENST00000397101 RRAGBQ5VZM2 374 aa15.02■□□□□ -0
SEC13-205ENST00000397101 PARM1Q6UWI2 310 aa15.02■□□□□ -0
SEC13-205ENST00000397101 SPATA31D4Q6ZUB0 917 aa15.02■□□□□ -0
SEC13-205ENST00000397101 USP49Q70CQ1 688 aa15.02■□□□□ -0
SEC13-205ENST00000397101 RTL10Q7L3V2 364 aa15.02■□□□□ -0
SEC13-205ENST00000397101 TPH2Q8IWU9 490 aa15.02■□□□□ -0
SEC13-205ENST00000397101 C4orf19Q8IY42 314 aa15.02■□□□□ -0
SEC13-205ENST00000397101 RNF149Q8NC42 400 aa15.02■□□□□ -0
SEC13-205ENST00000397101 GSTCDQ8NEC7 633 aa15.02■□□□□ -0
SEC13-205ENST00000397101 CLDN23Q96B33 292 aa15.02■□□□□ -0
SEC13-205ENST00000397101 DYDC2Q96IM9 177 aa15.02■□□□□ -0
SEC13-205ENST00000397101 EIF2AK1Q9BQI3 630 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 PYM1Q9BRP8 204 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 RPP25Q9BUL9 199 aaKnown RBP15.02■□□□□ -0
SEC13-205ENST00000397101 GPR62Q9BZJ7 368 aa15.02■□□□□ -0
SEC13-205ENST00000397101 GOLPH3LQ9H4A5 285 aa15.02■□□□□ -0
SEC13-205ENST00000397101 LTB4R2Q9NPC1 389 aa15.02■□□□□ -0
SEC13-205ENST00000397101 ADAM28Q9UKQ2 775 aa15.02■□□□□ -0
SEC13-205ENST00000397101 TCHHQ07283 1943 aa15.02□□□□□ -0.01
SEC13-205ENST00000397101 CFAP47Q6ZTR5 3102 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 NCAM2O15394 837 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 POLR2DO15514 142 aaKnown RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 TSPAN1O60635 241 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 LRRN2O75325 713 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 LIG1P18858 919 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 RPS9P46781 194 aaKnown RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 NDUFA8P51970 172 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 FAM160A1Q05DH4 1040 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 GRIK3Q13003 919 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 SNW1Q13573 536 aaKnown RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 CTTNQ14247 550 aaKnown RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 MXD4Q14582 209 aaPredicted RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 TMEM143Q96AN5 459 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 DHX58Q96C10 678 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
SEC13-205ENST00000397101 NFKBIZQ9BYH8 718 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 CCSER1Q9C0I3 900 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 ACACBO00763 2458 aa15.01□□□□□ -0.01
SEC13-205ENST00000397101 MIA3Q5JRA6 1907 aa15□□□□□ -0.01
SEC13-205ENST00000397101 SF3B1O75533 1304 aaKnown RBP eCLIP15□□□□□ -0.014e-7■■■■■ 86.2
SEC13-205ENST00000397101 FAM170BA6NMN3 283 aa15□□□□□ -0.01
SEC13-205ENST00000397101 F8W810 466 aa15□□□□□ -0.01
SEC13-205ENST00000397101 MYBP10242 640 aa15□□□□□ -0.01
SEC13-205ENST00000397101 TGM1P22735 817 aa15□□□□□ -0.01
SEC13-205ENST00000397101 STAT6P42226 847 aa15□□□□□ -0.01
SEC13-205ENST00000397101 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
SEC13-205ENST00000397101 UVSSAQ2YD98 709 aa15□□□□□ -0.01
SEC13-205ENST00000397101 ZBTB41Q5SVQ8 909 aa15□□□□□ -0.01
SEC13-205ENST00000397101 LIN9Q5TKA1 542 aa15□□□□□ -0.01
SEC13-205ENST00000397101 MAMSTRQ6ZN01 415 aa15□□□□□ -0.01
SEC13-205ENST00000397101 OTUD6AQ7L8S5 288 aa15□□□□□ -0.01
SEC13-205ENST00000397101 GRASPQ7Z6J2 395 aaPredicted RBP15□□□□□ -0.01
SEC13-205ENST00000397101 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
SEC13-205ENST00000397101 IQUBQ8NA54 791 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms