RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 DSC3Q14574 896 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 UBXN11Q5T124 520 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 TRIP11Q15643 1979 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 CTAGE9A4FU28 777 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 NPTXRO95502 500 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 ACOT2P49753 483 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 TUBB4BP68371 445 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 BFSP1Q12934 665 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 CEP120Q8N960 986 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 EIF2AQ9BY44 585 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 ARFGAP3Q9NP61 516 aa16.05■□□□□ 0.16
TM9SF1-202ENST00000396854 RNF225M0QZC1 329 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 CXCL10P02778 98 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 TNFSF9P41273 254 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 GRM5P41594 1212 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 CYP24A1Q07973 514 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 MIIPQ5JXC2 388 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 TWF2Q6IBS0 349 aaKnown RBP16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 BRSK2Q8IWQ3 736 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 ACRBPQ8NEB7 543 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 LTBP2Q14767 1821 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 SASH3O75995 380 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 CLTAP09496 248 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 KRT13P13646 458 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 CYP2C18P33260 490 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 ARHGAP25P42331 645 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 UBXN1Q04323 297 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 BRD3Q15059 726 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 SEZ6Q53EL9 994 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 TMC2Q8TDI7 906 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 SLC35C1Q96A29 364 aa16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 RBAKQ9NYW8 714 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-202ENST00000396854 TIMP1P01033 207 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 RFC2P35250 354 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 KRT9P35527 623 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 VAMP7P51809 220 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 PSMD6Q15008 389 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 VWA3BQ502W6 1294 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 PARD3BQ8TEW8 1205 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 APBB2Q92870 758 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 SCLYQ96I15 445 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 FTHL17Q9BXU8 183 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 MGEA5O60502 916 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 STAG3L1P0CL83 205 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 CCL23P55773 120 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 ENOX2Q16206 610 aaKnown RBP16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 USP37Q86T82 979 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 TMEM192Q8IY95 271 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 TRIM43Q96BQ3 446 aaPredicted RBP16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 IPPQ9Y573 584 aa16.03■□□□□ 0.16
TM9SF1-202ENST00000396854 RBAK-RBAKDNI3L0D1 243 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 RAB27AP51159 221 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 CLDN10P78369 228 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 SURF1Q15526 300 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 DCAF17Q5H9S7 520 aaPredicted RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 C1orf220Q5T0J3 134 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 ACAP3Q96P50 834 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 ERGIC2Q96RQ1 377 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 NAPGQ99747 312 aaPredicted RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 FUT8Q9BYC5 575 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 NDST4Q9H3R1 872 aa16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 NXF3Q9H4D5 531 aaKnown RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 RPF1Q9H9Y2 349 aaKnown RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 PRDM5Q9NQX1 630 aaPredicted RBP16.02■□□□□ 0.15
TM9SF1-202ENST00000396854 ZNF623O75123 536 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 WNT7BP56706 349 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 OSTNP61366 133 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 DLG4P78352 724 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 WHAMMP3Q1A5X7 153 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 TAF3Q5VWG9 929 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 DBF4BQ8NFT6 615 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 HNRNPLLQ8WVV9 542 aaKnown RBP16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 SEPT8Q92599 483 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 DNAJC7Q99615 494 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 ADAM2Q99965 735 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 ANKZF1Q9H8Y5 726 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms