RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RRN3Q9NYV6 651 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 E5RI56 91 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 FBXO21O94952 628 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 F9P00740 461 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 FAM9CQ8IZT9 166 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 PIP4K2CQ8TBX8 421 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 CYP3A43Q9HB55 503 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 CXCL11O14625 94 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 SUPT20HL2P0C7V6 817 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 OCRLQ01968 901 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 NCOA4Q13772 614 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 TRIM59Q8IWR1 403 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 JMJD4Q9H9V9 463 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 L3MBTL1Q9Y468 752 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 TTC26A0AVF1 554 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 MAP2K2P36507 400 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 BYSLQ13895 437 aaKnown RBP16.49■□□□□ 0.23
GNE-202ENST00000396594 CYFIP1Q7L576 1253 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 RASSF3Q86WH2 238 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 GANCQ8TET4 914 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 OTUB1Q96FW1 271 aaPredicted RBP16.49■□□□□ 0.23
GNE-202ENST00000396594 WWP1Q9H0M0 922 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 H2AFYO75367 372 aaKnown RBP16.49■□□□□ 0.23
GNE-202ENST00000396594 CDO1Q16878 200 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 INPP5FQ9Y2H2 1132 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 PSMD14O00487 310 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 INPP1P49441 399 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 CLCN6P51797 869 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 PRKCEQ02156 737 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 BFSP2Q13515 415 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.23
GNE-202ENST00000396594 MTFR1Q15390 333 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 BOLA3Q53S33 107 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 RALBP11234 206 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 SREBF1P36956 1147 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 FDFT1P37268 417 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 CAP2P40123 477 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
GNE-202ENST00000396594 MED21Q13503 144 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
GNE-202ENST00000396594 SNX19Q92543 992 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 TSPAN18Q96SJ8 248 aa16.49■□□□□ 0.23
GNE-202ENST00000396594 NMT2O60551 498 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 SPAG7O75391 227 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 ODC1P11926 461 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 MRFAP1Q9Y605 127 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 GTPBP10A4D1E9 387 aaKnown RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 PSTPIP1O43586 416 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 IMPG1Q17R60 797 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 TBC1D1Q86TI0 1168 aaPredicted RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 DCUN1D1Q96GG9 259 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 SCOCQ9UIL1 159 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 CFAP99D6REC4 459 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 AXLP30530 894 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 TAF6P49848 677 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 OXCT1P55809 520 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 ANKRD40Q6AI12 368 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 STOX1Q6ZVD7 989 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 MYLK4Q86YV6 388 aaPredicted RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 DDX27Q96GQ7 796 aaKnown RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 SNX12Q9UMY4 172 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 KCNQ2O43526 872 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 LSM8O95777 96 aaKnown RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 MMEP08473 750 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 CDH6P55285 790 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 TTC19Q6DKK2 380 aaPredicted RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
GNE-202ENST00000396594 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
GNE-202ENST00000396594 TTC36A6NLP5 189 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 PYGLP06737 847 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 PDIA6Q15084 440 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 HIF1AQ16665 826 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 FAM182BQ5T319 152 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 PCNX4Q63HM2 1172 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 AP1M1Q9BXS5 423 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 TADA2AO75478 443 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 SULT1E1P49888 294 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 RCN2Q14257 317 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 MORF4L2Q15014 288 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 CMTM5Q96DZ9 223 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 LBHD1Q9BQE6 289 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms