RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 IER2Q9BTL4 223 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 CCDC113Q9H0I3 377 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 ZSCAN32Q9NX65 697 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 DNMT3BQ9UBC3 853 aaKnown RBP19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 GPR179Q6PRD1 2367 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 CACNA1IQ9P0X4 2223 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 ARHGEF35A5YM69 484 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 POTEMA6NI47 508 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 MICAL2O94851 1124 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 SAFBQ15424 915 aaKnown RBP eCLIP19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 MAMSTRQ6ZN01 415 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 ZBTB44Q8NCP5 570 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 ZNF461Q8TAF7 563 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 DNASE1L2Q92874 299 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 GTF3C6Q969F1 213 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 PPP1R10Q96QC0 940 aaKnown RBP19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 TOPORSQ9NS56 1045 aaPredicted RBP19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 SLC38A7Q9NVC3 462 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 NCDNQ9UBB6 729 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 CACNG4Q9UBN1 327 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 CDY1Q9Y6F8 540 aa19.27■□□□□ 0.68
EXOSC3-202ENST00000396521 ARID2Q68CP9 1835 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ARHGEF37A1IGU5 675 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 PRR5-ARHGAP8B1AHC4 643 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 MAN2B1O00754 1011 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ZNF197O14709 1029 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ADAM12O43184 909 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 PTPN2P17706 415 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ELF1P32519 619 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ARHGAP8P85298 464 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 CSTF1Q05048 431 aaKnown RBP19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 PPP2R5DQ14738 602 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 UPP1Q16831 310 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 HAUS3Q68CZ6 603 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 ELSPBP1Q96BH3 223 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 KXD1Q9BQD3 176 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 MAFFQ9ULX9 164 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 GDAQ9Y2T3 454 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 STK24Q9Y6E0 443 aa19.26■□□□□ 0.67
EXOSC3-202ENST00000396521 NCOR2Q9Y618 2525 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 TBC1D4O60343 1298 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 MED24O75448 989 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 LRG1P02750 347 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 YARSP54577 528 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 ADCY1Q08828 1119 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 ATF7IP2Q5U623 682 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 NELL1Q92832 810 aa19.25■□□□□ 0.67
EXOSC3-202ENST00000396521 A0A087WWV3 80 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TTLL13PA6NNM8 815 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 H7C4K7 107 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 K7ERI5 159 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 SYN3O14994 580 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 LRRN2O75325 713 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 RHOP08100 348 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 MCM7P33993 719 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 CLCNKBP51801 687 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 NRLP54845 237 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 LMNB2Q03252 620 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TPGS2Q68CL5 300 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TPRG1Q6ZUI0 275 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 CCDC94Q9BW85 323 aaPredicted RBP19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 EPC1Q9H2F5 836 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TMEM60Q9H2L4 133 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TRPV5Q9NQA5 729 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 HCFC1R1Q9NWW0 138 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 TNFSF13BQ9Y275 285 aa19.24■□□□□ 0.67
EXOSC3-202ENST00000396521 MED19A0JLT2 244 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 PRRG1O14668 218 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 LILRB5O75023 590 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 ABLIM3O94929 683 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 ATF2P15336 505 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 RPL9P32969 192 aaKnown RBP19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 ME3Q16798 604 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 XKR4Q5GH76 650 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 TCEAL8Q8IYN2 117 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 DCLK2Q8N568 766 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 LEMD2Q8NC56 503 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 ST13P5Q8NFI4 369 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 BSNDQ8WZ55 320 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 ZFP14Q9HCL3 533 aa19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-202ENST00000396521 DNAH14Q0VDD8 3507 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 SMIM28A0A1B0GU29 152 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 OR52Z1P0C646 297 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 LIG1P18858 919 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 TARSP26639 723 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 TKTP29401 623 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 GRM5P41594 1212 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 RSPO4Q2I0M5 234 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 EEF1DP3Q658K8 133 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 ELMOD1Q8N336 334 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 NECAB1Q8N987 351 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 IRF7Q92985 503 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 MCRS1Q96EZ8 462 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 KCNG1Q9UIX4 513 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms