RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
CBX3-202ENST00000396386 MCL1Q07820 350 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 PAK2Q13177 524 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 LAMC2Q13753 1193 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 CLUL1Q15846 466 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
CBX3-202ENST00000396386 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 EMBQ6PCB8 327 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 ANKRD23Q86SG2 305 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 ZBTB33Q86T24 672 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 WDR49Q8IV35 697 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
CBX3-202ENST00000396386 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 MS4A4AQ96JQ5 239 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
CBX3-202ENST00000396386 KRIT1O00522 736 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 RAD51CO43502 376 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 GLI1P08151 1106 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 CLTAP09496 248 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 FKBP1BP68106 108 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 FAM193AP78312 1265 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 GUCY2DQ02846 1103 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 SURF1Q15526 300 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 SEZ6Q53EL9 994 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 HSP90B2PQ58FF3 399 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 DCAF12L1Q5VU92 463 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 SPOPLQ6IQ16 392 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■□□□ 13
CBX3-202ENST00000396386 ZNF467Q7Z7K2 595 aaPredicted RBP16.03■□□□□ 0.16
CBX3-202ENST00000396386 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 NLRP4Q96MN2 994 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 HINFPQ9BQA5 517 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 MED4Q9NPJ6 270 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 UVRAGQ9P2Y5 699 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 ALG6Q9Y672 507 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 TMEM110-MUSTN1A8MSY1 372 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 ABLIM1O14639 778 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 ASAP2O43150 1006 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 C22orf31O95567 290 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 LGALS2P05162 132 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 TNFSF9P41273 254 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
CBX3-202ENST00000396386 CLCN3P51790 818 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 NNTQ13423 1086 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 NCOA4Q13772 614 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 TERF2Q15554 542 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 ZNF484Q5JVG2 852 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 MPZL3Q6UWV2 235 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 FAM71BQ8TC56 605 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 BRI3BPQ8WY22 251 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 CAVIN3Q969G5 261 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 TRIM11Q96F44 468 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
CBX3-202ENST00000396386 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 NAP1L3Q99457 506 aaPredicted RBP16.03■□□□□ 0.16
CBX3-202ENST00000396386 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 APOBEC3GQ9HC16 384 aaKnown RBP16.03■□□□□ 0.16
CBX3-202ENST00000396386 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 EVPLQ92817 2033 aa16.03■□□□□ 0.16
CBX3-202ENST00000396386 RBM47A0AV96 593 aaKnown RBP16.02■□□□□ 0.16
CBX3-202ENST00000396386 STRNO43815 780 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 ACO1P21399 889 aaKnown RBP16.02■□□□□ 0.16
CBX3-202ENST00000396386 MKRN3Q13064 507 aaKnown RBP16.02■□□□□ 0.16
CBX3-202ENST00000396386 MESDQ14696 234 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 ZNF568Q3ZCX4 644 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 EFCAB12Q6NXP0 572 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 SLITRK6Q9H5Y7 841 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
CBX3-202ENST00000396386 CPSF3Q9UKF6 684 aaKnown RBP16.02■□□□□ 0.16
CBX3-202ENST00000396386 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.16
CBX3-202ENST00000396386 COL1A2P08123 1366 aa16.02■□□□□ 0.15
CBX3-202ENST00000396386 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 ACKR2O00590 384 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 FGGP02679 453 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 PROZP22891 400 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 ATF7IP2Q5U623 682 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 TRIM72Q6ZMU5 477 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 PPTC7Q8NI37 304 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 EMID1Q96A84 441 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 INO80BQ9C086 356 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 FZD8Q9H461 694 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 GBA2Q9HCG7 927 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 CNOT8Q9UFF9 292 aaKnown RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 MGAMO43451 1857 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 MYBL1P10243 752 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms