RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 RARRES1P49788 294 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 PTENP60484 403 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 GPC5P78333 572 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 SNCBQ16143 134 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 HAUS6Q7Z4H7 955 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 HOOK3Q86VS8 718 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 SLC17A8Q8NDX2 589 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 KIF12Q96FN5 646 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 PLCD4Q9BRC7 762 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 C11orf70Q9BRQ4 267 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 FAM213AQ9BRX8 229 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 LARSQ9P2J5 1176 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 ANKFY1Q9P2R3 1169 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ANKRD62A6NC57 917 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 FZD9O00144 591 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 HNRNPDLO14979 420 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 EIF3DO15371 548 aaKnown RBP eCLIP9.93□□□□□ -0.826e-8■□□□□ 10.9
NDE1-201ENST00000396354 TNNI1P19237 187 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ACOT2P49753 483 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 HMGCS2P54868 508 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 GHRHRQ02643 423 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 MYO1EQ12965 1108 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ACCSLQ4AC99 568 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ATP13A4Q4VNC1 1196 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ANKS4BQ8N8V4 417 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 BSNDQ8WZ55 320 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ARHGEF2Q92974 986 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 TMEM117Q9H0C3 514 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 PABPC3Q9H361 631 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 SLITRK6Q9H5Y7 841 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 SLC24A3Q9HC58 644 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 TPX2Q9ULW0 747 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 LAMA3Q16787 3333 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 TMEM120BA0PK00 339 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 BANF1O75531 89 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CFHP08603 1231 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 KRT10P13645 584 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 TNFRSF8P28908 595 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 MAPK4P31152 587 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 HIRAP54198 1017 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 KCNJ2P63252 427 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 MTMR1Q13613 665 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 TMED2Q15363 201 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 EAPPQ56P03 285 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ANGEL2Q5VTE6 544 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 PCNX4Q63HM2 1172 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 MREGQ8N565 214 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 LMO3Q8TAP4 145 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 RIT2Q99578 217 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 PDCD2LQ9BRP1 358 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 PXMP2Q9NR77 195 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 SLC16A3O15427 465 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZNF862O60290 1169 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 GAP43P17677 238 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 PRKCIP41743 596 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 C10orf76Q5T2E6 689 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 C9orf131Q5VYM1 1079 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZDHHC24Q6UX98 284 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 EP400NLQ6ZTU2 488 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CCDC91Q7Z6B0 441 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 FUKQ8N0W3 1084 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CNPY4Q8N129 248 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 KLF6Q99612 283 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZSWIM1Q9BR11 485 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 HERPUD2Q9BSE4 406 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 C12orf65Q9H3J6 166 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ODF2LQ9ULJ1 636 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZNFX1Q9P2E3 1918 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 WDR90Q96KV7 1748 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 DENND3A2RUS2 1198 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 GOLGA8RI6L899 631 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 UBOX5O94941 541 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ECEL1O95672 775 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ETS1P14921 441 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 SCP2P22307 547 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ZNF449Q6P9G9 518 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 ANO5Q75V66 913 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CDR2LQ86X02 465 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 C4orf33Q8N1A6 199 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CCDC63Q8NA47 563 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 KREMEN1Q96MU8 473 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 WRNIP1Q96S55 665 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 RMDN3Q96TC7 470 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 SYT11Q9BT88 431 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 CDC42EP4Q9H3Q1 356 aaKnown RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 SAE1Q9UBE0 346 aaPredicted RBP9.92□□□□□ -0.82
NDE1-201ENST00000396354 MTUS1Q9ULD2 1270 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 STXBP5LQ9Y2K9 1186 aa9.92□□□□□ -0.82
NDE1-201ENST00000396354 KAT6AQ92794 2004 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms