RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PPP1R2P41236 205 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 CBWD2Q8IUF1 395 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 SLC9A9Q8IVB4 645 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 RDH13Q8NBN7 331 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 TMEM174Q8WUU8 243 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 C18orf25Q96B23 403 aaPredicted RBP20.85■□□□□ 0.93
HOXA9-202ENST00000396345 CDX2Q99626 313 aaPredicted RBP20.85■□□□□ 0.93
HOXA9-202ENST00000396345 ALG13Q9NP73 1137 aaKnown RBP20.85■□□□□ 0.93
HOXA9-202ENST00000396345 DMAC2Q9NW81 257 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 MTMR10Q9NXD2 777 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 ANK1P16157 1881 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 COL4A4P53420 1690 aaPredicted RBP20.84■□□□□ 0.93
HOXA9-202ENST00000396345 TRANK1O15050 2925 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 PPP1R3GB7ZBB8 358 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 PSMA7O14818 248 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 LPXNO60711 386 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 KRT17Q04695 432 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 MYBPC2Q14324 1141 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 SNRNP35Q16560 246 aaKnown RBP20.84■□□□□ 0.93
HOXA9-202ENST00000396345 NFIL3Q16649 462 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 JADE1Q6IE81 842 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 CENPPQ6IPU0 288 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 SPPL3Q8TCT6 385 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 TMEM169Q96HH4 297 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 DHTKD1Q96HY7 919 aaPredicted RBP20.84■□□□□ 0.93
HOXA9-202ENST00000396345 IGSF21Q96ID5 467 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 GUCD1Q96NT3 240 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 GAS2L1Q99501 681 aaPredicted RBP20.84■□□□□ 0.93
HOXA9-202ENST00000396345 TSG101Q99816 390 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 COLEC11Q9BWP8 271 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 CACNG4Q9UBN1 327 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 DERAQ9Y315 318 aa20.84■□□□□ 0.93
HOXA9-202ENST00000396345 GRM6O15303 877 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 XPOTO43592 962 aaKnown RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 NFICP08651 508 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 RPL13P26373 211 aaKnown RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 PLCB3Q01970 1234 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 SOX4Q06945 474 aaPredicted RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 TMEM132DQ14C87 1099 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 ZBTB6Q15916 424 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 EDRF1Q3B7T1 1238 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 ZCWPW2Q504Y3 356 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 CCDC183Q5T5S1 534 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 KLHL10Q6JEL2 608 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 TMEM173Q86WV6 379 aaPredicted RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 RABGGTAQ92696 567 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 UROC1Q96N76 676 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 PAAF1Q9BRP4 392 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 GOLGA2P5Q9HBQ8 144 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 UBQLN1Q9UMX0 589 aaKnown RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 C2CD2Q9Y426 696 aa20.83■□□□□ 0.93
HOXA9-202ENST00000396345 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.83■□□□□ 0.93
HOXA9-202ENST00000396345 PLXNA4Q9HCM2 1894 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 CYP3A5P20815 502 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 NR2F2P24468 414 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 CCNE1P24864 410 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 WNT7BP56706 349 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 UBE3AQ05086 875 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 ADAM9Q13443 819 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 SURF1Q15526 300 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 BEST2Q8NFU1 509 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 BCL7CQ8WUZ0 217 aaPredicted RBP20.82■□□□□ 0.92
HOXA9-202ENST00000396345 POF1BQ8WVV4 589 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 MYLIPQ8WY64 445 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 DDX27Q96GQ7 796 aaKnown RBP20.82■□□□□ 0.92
HOXA9-202ENST00000396345 LMAN2LQ9H0V9 348 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 PDE11AQ9HCR9 933 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 MARCH5Q9NX47 278 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 TUBGCP4Q9UGJ1 667 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 PUF60Q9UHX1 559 aaKnown RBP20.82■□□□□ 0.92
HOXA9-202ENST00000396345 LZTS1Q9Y250 596 aa20.82■□□□□ 0.92
HOXA9-202ENST00000396345 F8W810 466 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 RPL9P32969 192 aaKnown RBP20.81■□□□□ 0.92
HOXA9-202ENST00000396345 CLCNKBP51801 687 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 LRRC63Q05C16 580 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 CYP24A1Q07973 514 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 ADGRE1Q14246 886 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 PTPROQ16827 1216 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 UPP1Q16831 310 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 CEP135Q66GS9 1140 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 ANKRD40Q6AI12 368 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 RBM43Q6ZSC3 357 aaKnown RBP20.81■□□□□ 0.92
HOXA9-202ENST00000396345 NT5DC4Q86YG4 428 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 NELFBQ8WX92 580 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 MFSD14AQ96MC6 490 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 FRMD4BQ9Y2L6 1034 aa20.81■□□□□ 0.92
HOXA9-202ENST00000396345 TRIM49BA6NDI0 452 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 PODXLO00592 558 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 TADA2AO75478 443 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 IGFBP4P22692 258 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 DNAJB1P25685 340 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 CASP4P49662 377 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 GUCY2FP51841 1108 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 PMS1P54277 932 aaKnown RBP20.8■□□□□ 0.92
HOXA9-202ENST00000396345 NLRP12P59046 1061 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 PSMD6Q15008 389 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 DCLRE1AQ6PJP8 1040 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 DDX53Q86TM3 631 aaKnown RBP20.8■□□□□ 0.92
HOXA9-202ENST00000396345 EFCAB13Q8IY85 973 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms