RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 MYLK2Q9H1R3 596 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 MLXIPLQ9NP71 852 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CHST7Q9NS84 486 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 SPATS2LQ9NUQ6 558 aaKnown RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 TRIM33Q9UPN9 1127 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 COQ4Q9Y3A0 265 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 ATRNL1Q5VV63 1379 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 LY75O60449 1722 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CYP26A1O43174 497 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 PEX11AO75192 247 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 NDUFB10O96000 172 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 MYBL1P10243 752 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 HOXA13P31271 388 aaPredicted RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 WDR4P57081 412 aaKnown RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 SPARCL1Q14515 664 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RASA2Q15283 850 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CCNG2Q16589 344 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 AMIGO3Q86WK7 504 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 DENND1AQ8TEH3 1009 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CFAP57Q96MR6 1250 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 TTC25Q96NG3 672 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 IWS1Q96ST2 819 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RASA4BC9J798 803 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RASA4O43374 803 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RAD21O60216 631 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 CETPP11597 493 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 BMP3P12645 472 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RXRBP28702 533 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 ADCY8P40145 1251 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 MRPS35P82673 323 aaKnown RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 TMEM63BQ5T3F8 832 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 NAIF1Q69YI7 327 aaPredicted RBP9.26□□□□□ -0.93
BDNF-204ENST00000395980 TRABD2AQ86V40 505 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 SLC47A2Q86VL8 602 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CPNE8Q86YQ8 564 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 LMNTD2Q8IXW0 634 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 RDH13Q8NBN7 331 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 ZNF398Q8TD17 642 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 FBXO41Q8TF61 875 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 LRRC37BQ96QE4 947 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 LRRC4BQ9NT99 713 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 HSPBP1Q9NZL4 362 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 PI4KBQ9UBF8 816 aa9.26□□□□□ -0.93
BDNF-204ENST00000395980 CHMP2AO43633 222 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 MAPK4P31152 587 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ABL2P42684 1182 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 GPC3P51654 580 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 CLEC16AQ2KHT3 1053 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ZCCHC9Q8N567 271 aaKnown RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ZNF483Q8TF39 744 aaPredicted RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 DDX1Q92499 740 aaKnown RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 KAT5Q92993 513 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 LXNQ9BS40 222 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 TEKT3Q9BXF9 490 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 TLE6Q9H808 572 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ZNFX1Q9P2E3 1918 aaKnown RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 ZBTB39O15060 712 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ENPEPQ07075 957 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 KLF1Q13351 362 aaPredicted RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 SNX1Q13596 522 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 PDK4Q16654 411 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 CEP55Q53EZ4 464 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ZNF365Q70YC5 407 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.25□□□□□ -0.93
BDNF-204ENST00000395980 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 RIT2Q99578 217 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 TIPINQ9BVW5 301 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 CHKBQ9Y259 395 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ADAMTSL1Q8N6G6 1762 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 NDC80O14777 642 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 EDF1O60869 148 aaKnown RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 TPBGLP0DKB5 382 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 NFIAQ12857 509 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 PADI6Q6TGC4 694 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 ENOSF1Q7L5Y1 443 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 PPM1KQ8N3J5 372 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 OSBPL1AQ9BXW6 950 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 UNC45AQ9H3U1 944 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 SAR1AQ9NR31 198 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 WRAP73Q9P2S5 460 aaPredicted RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 CHORDC1Q9UHD1 332 aaPredicted RBP9.25□□□□□ -0.93
BDNF-204ENST00000395980 ANAPC7Q9UJX3 599 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 PHTF1Q9UMS5 762 aa9.25□□□□□ -0.93
BDNF-204ENST00000395980 A0A1W2PRG0 241 aa9.24□□□□□ -0.93
BDNF-204ENST00000395980 ACADSP16219 412 aa9.24□□□□□ -0.93
BDNF-204ENST00000395980 GTF2BQ00403 316 aa9.24□□□□□ -0.93
BDNF-204ENST00000395980 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
BDNF-204ENST00000395980 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms