RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MTCL1Q9Y4B5 1905 aaKnown RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 TADA2AO75478 443 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 SRFP11831 508 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 SDHBP21912 280 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 GBP2P32456 591 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 HSP90AA2PQ14568 343 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 RSPO4Q2I0M5 234 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 DCAF4L1Q3SXM0 396 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 SPECC1Q5M775 1068 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 ATF7IP2Q5U623 682 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 ARL6IP4Q66PJ3 421 aaKnown RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 LILRA6Q6PI73 481 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 CYP26C1Q6V0L0 522 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 SLC44A3Q8N4M1 653 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 DCLK2Q8N568 766 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 RSAD2Q8WXG1 361 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 RABGGTAQ92696 567 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 B3GALT6Q96L58 329 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 NTPCRQ9BSD7 190 aaKnown RBP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 RUSC1Q9BVN2 902 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 PTPRHQ9HD43 1115 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.88□□□□□ -0.03
SCAF11-203ENST00000395453 ARHGAP28Q9P2N2 729 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 CACNG4Q9UBN1 327 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 TNFSF13BQ9Y275 285 aa14.88□□□□□ -0.03
SCAF11-203ENST00000395453 GPR179Q6PRD1 2367 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 HIP1RO75146 1068 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 DCNP07585 359 aaKnown RBP14.87□□□□□ -0.03
SCAF11-203ENST00000395453 LIG1P18858 919 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 GUCY2CP25092 1073 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 PEX3P56589 373 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 TMEM132AQ24JP5 1023 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 ELMSAN1Q6PJG2 1045 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 TAS1R3Q7RTX0 852 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 PDCD7Q8N8D1 485 aaKnown RBP14.87□□□□□ -0.03
SCAF11-203ENST00000395453 BORCS6Q96GS4 357 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 DRC1Q96MC2 740 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 PNMA5Q96PV4 448 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 ACO2Q99798 780 aaKnown RBP14.87□□□□□ -0.03
SCAF11-203ENST00000395453 TIPINQ9BVW5 301 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 C17orf75Q9HAS0 396 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 WDR6Q9NNW5 1121 aaKnown RBP14.87□□□□□ -0.03
SCAF11-203ENST00000395453 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 EPS15L1Q9UBC2 864 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 DPP7Q9UHL4 492 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
SCAF11-203ENST00000395453 TRIP11Q15643 1979 aa14.87□□□□□ -0.03
SCAF11-203ENST00000395453 CCDC195A0A1B0GUA6 201 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 CASTOR2A6NHX0 329 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 CCDC169A6NNP5 214 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 H3BQV1 296 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 KINO60870 393 aaKnown RBP14.86□□□□□ -0.03
SCAF11-203ENST00000395453 N4BP1O75113 896 aaKnown RBP14.86□□□□□ -0.03
SCAF11-203ENST00000395453 GLUD1P00367 558 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 ALKAL1Q6UXT8 129 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 SYT2Q8N9I0 419 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-203ENST00000395453 SUMF1Q8NBK3 374 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 PPP1R10Q96QC0 940 aaKnown RBP14.86□□□□□ -0.03
SCAF11-203ENST00000395453 PLEKHA4Q9H4M7 779 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 DLGAP2Q9P1A6 1054 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 SMC3Q9UQE7 1217 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 GDAQ9Y2T3 454 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-203ENST00000395453 FANCMQ8IYD8 2048 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 CACNA1IQ9P0X4 2223 aa14.86□□□□□ -0.03
SCAF11-203ENST00000395453 SF3B1O75533 1304 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■■■ 107.2
SCAF11-203ENST00000395453 PHLPP2Q6ZVD8 1323 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 VWA3AA6NCI4 1184 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 TGM5O43548 720 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 KIF4AO95239 1232 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 PROZP22891 400 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 CREMQ03060 361 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 DMP1Q13316 513 aaPredicted RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 RTP2Q5QGT7 225 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 PALB2Q86YC2 1186 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 GPR161Q8N6U8 529 aaKnown RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 GPR152Q8TDT2 470 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 ZNF707Q96C28 371 aaPredicted RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 TTPALQ9BTX7 342 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 MRPL4Q9BYD3 311 aaKnown RBP14.85□□□□□ -0.03
SCAF11-203ENST00000395453 NT5C3AQ9H0P0 336 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 KMT5AQ9NQR1 393 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 ARHGEF3Q9NR81 526 aa14.85□□□□□ -0.03
SCAF11-203ENST00000395453 CLUHO75153 1309 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SFI1A8K8P3 1242 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 TMEM189-UBE2V1I3L0A0 370 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 ABLIM1O14639 778 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SLC26A4O43511 780 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 RFPL2O75678 378 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 GRM5P41594 1212 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 SLC12A3P55017 1021 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 CUL4AQ13619 759 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
SCAF11-203ENST00000395453 FAM171A1Q5VUB5 890 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms