RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CSDE1O75534 798 aaKnown RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 GFPT2O94808 682 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 DARSP14868 501 aaKnown RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 GCLMP48507 274 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 SLC18A3Q16572 532 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 C10orf76Q5T2E6 689 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 KRT39Q6A163 491 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 TRAF7Q6Q0C0 670 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 IFNLR1Q8IU57 520 aaPredicted RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 INO80BQ9C086 356 aaPredicted RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 TMEM117Q9H0C3 514 aa20.84■□□□□ 0.93
LMNB1-202ENST00000395354 AGO2Q9UKV8 859 aaKnown RBP20.84■□□□□ 0.93
LMNB1-202ENST00000395354 UMODL1Q5DID0 1318 aa20.83■□□□□ 0.93
LMNB1-202ENST00000395354 TRIM43BA6NCK2 446 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 LRRIQ3A6PVS8 624 aaPredicted RBP20.83■□□□□ 0.92
LMNB1-202ENST00000395354 INO80B-WBP1J3KQ70 363 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 KIAA0355O15063 1070 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 SOX5P35711 763 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 MAGEA1P43355 309 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 CLDN10P78369 228 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 CYP27A1Q02318 531 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 PSMD6Q15008 389 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 TMEM40Q8WWA1 233 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 TRIM43Q96BQ3 446 aaPredicted RBP20.83■□□□□ 0.92
LMNB1-202ENST00000395354 FAM213AQ9BRX8 229 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 MRPL4Q9BYD3 311 aaKnown RBP20.83■□□□□ 0.92
LMNB1-202ENST00000395354 IRX2Q9BZI1 471 aaPredicted RBP20.83■□□□□ 0.92
LMNB1-202ENST00000395354 MINDY3Q9H8M7 445 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 GUCA1BQ9UMX6 200 aa20.83■□□□□ 0.92
LMNB1-202ENST00000395354 ATP8B3O60423 1300 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 A0A0B4J269 797 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 F8VZ95 297 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 EVI5O60447 810 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 URI1O94763 535 aaPredicted RBP20.82■□□□□ 0.92
LMNB1-202ENST00000395354 SLU7O95391 586 aaKnown RBP20.82■□□□□ 0.92
LMNB1-202ENST00000395354 IQCF3P0C7M6 154 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 CYP2C18P33260 490 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 MBTD1Q05BQ5 628 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 AJAP1Q9UKB5 411 aaPredicted RBP20.82■□□□□ 0.92
LMNB1-202ENST00000395354 ALPK3Q96L96 1907 aa20.82■□□□□ 0.92
LMNB1-202ENST00000395354 CTAGE9A4FU28 777 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 ABL1P00519 1130 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 TIMP1P01033 207 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 CCL23P55773 120 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 DRAP1Q14919 205 aaPredicted RBP20.81■□□□□ 0.92
LMNB1-202ENST00000395354 MAPK6Q16659 721 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 FBXO47Q5MNV8 452 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 VPS36Q86VN1 386 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 C7orf61Q8IZ16 206 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 SLC35F6Q8N357 371 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 DPF3Q92784 378 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 TARS2Q9BW92 718 aaKnown RBP20.81■□□□□ 0.92
LMNB1-202ENST00000395354 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 FZD8Q9H461 694 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 PRKAG2Q9UGJ0 569 aa20.81■□□□□ 0.92
LMNB1-202ENST00000395354 NOC2LQ9Y3T9 749 aaKnown RBP20.81■□□□□ 0.92
LMNB1-202ENST00000395354 MKI67P46013 3256 aaKnown RBP20.81■□□□□ 0.92
LMNB1-202ENST00000395354 RCCD1A6NED2 376 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 TOM1L1O75674 476 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 RAG1P15918 1043 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 ARID5AQ03989 594 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 PTK2Q05397 1052 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 GFPT1Q06210 699 aaPredicted RBP20.8■□□□□ 0.92
LMNB1-202ENST00000395354 MBTPS1Q14703 1052 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 PHLDB3Q6NSJ2 640 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 GJB7Q6PEY0 223 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 CCDC127Q96BQ5 260 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 NAPGQ99747 312 aaPredicted RBP20.8■□□□□ 0.92
LMNB1-202ENST00000395354 OSBPL7Q9BZF2 842 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 WNT8AQ9H1J5 351 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 SQORQ9Y6N5 450 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 RPS6KA5O75582 802 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 GHRP10912 638 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 FGFR4P22455 802 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 ITGB8P26012 769 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 LPIN1Q14693 890 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 SCLYQ96I15 445 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 MSTO1Q9BUK6 570 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 GPR88Q9GZN0 384 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 PRMT7Q9NVM4 692 aaPredicted RBP20.8■□□□□ 0.92
LMNB1-202ENST00000395354 TRIM10Q9UDY6 481 aa20.8■□□□□ 0.92
LMNB1-202ENST00000395354 ZC3H11AO75152 810 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 PRKCBP05771 671 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 BMS1Q14692 1282 aaKnown RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 PCBP1Q15365 356 aaKnown RBP eCLIP20.79■□□□□ 0.921e-18■□□□□ 8.3
LMNB1-202ENST00000395354 CRELD2Q6UXH1 353 aaPredicted RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 CATSPER4Q7RTX7 472 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 ZNF571Q7Z3V5 609 aaPredicted RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 RNF10Q8N5U6 811 aaKnown RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 FBXL13Q8NEE6 735 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 SECISBP2LQ93073 1101 aaKnown RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 FAM81BQ96LP2 452 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 ACO2Q99798 780 aaKnown RBP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMNB1-202ENST00000395354 HAPLN2Q9GZV7 340 aa20.79■□□□□ 0.92
LMNB1-202ENST00000395354 AGO3Q9H9G7 860 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms