RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 RRM1P23921 792 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 SLMAPQ14BN4 828 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 CNGA2Q16280 664 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 SPDYE2Q495Y8 402 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 PCNX4Q63HM2 1172 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 ACAD10Q6JQN1 1059 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 SEPT14Q6ZU15 432 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 TRPM8Q7Z2W7 1104 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 MIEF2Q96C03 454 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 TBC1D31Q96DN5 1066 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 COL2A1P02458 1487 aaPredicted RBP22.02■■□□□ 1.12
CLK3-202ENST00000395066 SCP2P22307 547 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 GJC1P36383 396 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 PGM5Q15124 567 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 KYNUQ16719 465 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 TLDC1Q6P9B6 456 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 ANKRD42Q8N9B4 389 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 TCP11Q8WWU5 503 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 TAOK3Q9H2K8 898 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 KMT5AQ9NQR1 393 aa22.02■■□□□ 1.12
CLK3-202ENST00000395066 ZNF277Q9NRM2 450 aaPredicted RBP22.02■■□□□ 1.12
CLK3-202ENST00000395066 MROH7Q68CQ1 1323 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 GPC3P51654 580 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 SPOPLQ6IQ16 392 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 PASD1Q8IV76 773 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 OGFOD1Q8N543 542 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 FAM213AQ9BRX8 229 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 NSRP1Q9H0G5 558 aaKnown RBP22.01■■□□□ 1.11
CLK3-202ENST00000395066 LRRC19Q9H756 370 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 ABCF3Q9NUQ8 709 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 WNT7BP56706 349 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 CLEC16AQ2KHT3 1053 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 CYFIP1Q7L576 1253 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 TMEM109Q9BVC6 243 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 UVRAGQ9P2Y5 699 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 TBK1Q9UHD2 729 aa22.01■■□□□ 1.11
CLK3-202ENST00000395066 GJB6O95452 261 aa22■■□□□ 1.11
CLK3-202ENST00000395066 GH1P01241 217 aa22■■□□□ 1.11
CLK3-202ENST00000395066 CLTAP09496 248 aa22■■□□□ 1.11
CLK3-202ENST00000395066 GBP1P32455 592 aa22■■□□□ 1.11
CLK3-202ENST00000395066 ITGA8P53708 1063 aa22■■□□□ 1.11
CLK3-202ENST00000395066 PSMC5P62195 406 aa22■■□□□ 1.11
CLK3-202ENST00000395066 DMP1Q13316 513 aaPredicted RBP22■■□□□ 1.11
CLK3-202ENST00000395066 MAP4K3Q8IVH8 894 aa22■■□□□ 1.11
CLK3-202ENST00000395066 GDAP1Q8TB36 358 aa22■■□□□ 1.11
CLK3-202ENST00000395066 CNKSR1Q969H4 720 aa22■■□□□ 1.11
CLK3-202ENST00000395066 VTI1AQ96AJ9 217 aa22■■□□□ 1.11
CLK3-202ENST00000395066 WNK4Q96J92 1243 aa22■■□□□ 1.11
CLK3-202ENST00000395066 STMN4Q9H169 189 aaPredicted RBP22■■□□□ 1.11
CLK3-202ENST00000395066 CFAP73A6NFT4 308 aa22■■□□□ 1.11
CLK3-202ENST00000395066 HGSO14964 777 aaPredicted RBP22■■□□□ 1.11
CLK3-202ENST00000395066 PLA2G6O60733 806 aa22■■□□□ 1.11
CLK3-202ENST00000395066 PSEN1P49768 467 aa22■■□□□ 1.11
CLK3-202ENST00000395066 TBC1D1Q86TI0 1168 aaPredicted RBP22■■□□□ 1.11
CLK3-202ENST00000395066 PNMA8AQ86V59 439 aaPredicted RBP22■■□□□ 1.11
CLK3-202ENST00000395066 TEX2Q8IWB9 1127 aa22■■□□□ 1.11
CLK3-202ENST00000395066 C4orf19Q8IY42 314 aa22■■□□□ 1.11
CLK3-202ENST00000395066 DYDC1Q8WWB3 177 aa22■■□□□ 1.11
CLK3-202ENST00000395066 ARHGEF2Q92974 986 aaKnown RBP22■■□□□ 1.11
CLK3-202ENST00000395066 RMDN3Q96TC7 470 aa22■■□□□ 1.11
CLK3-202ENST00000395066 TMEM120BA0PK00 339 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 FSCN2O14926 492 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 HNRNPDLO14979 420 aaKnown RBP21.99■■□□□ 1.11
CLK3-202ENST00000395066 CYP24A1Q07973 514 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 TNFAIP8L3Q5GJ75 292 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 C12orf50Q8NA57 414 aaPredicted RBP21.99■■□□□ 1.11
CLK3-202ENST00000395066 MORC4Q8TE76 937 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 FGFR1OP2Q9NVK5 253 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 COQ4Q9Y3A0 265 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 CLNS1AP54105 237 aaKnown RBP21.99■■□□□ 1.11
CLK3-202ENST00000395066 RIPK1Q13546 671 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 DHX37Q8IY37 1157 aaKnown RBP21.99■■□□□ 1.11
CLK3-202ENST00000395066 ZNF516Q92618 1163 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 KCNK9Q9NPC2 374 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 KLHL11Q9NVR0 708 aa21.99■■□□□ 1.11
CLK3-202ENST00000395066 COL4A5P29400 1685 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 MAPK13O15264 365 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 ZNF862O60290 1169 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 LYPLA2O95372 231 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 RPSAP08865 295 aaKnown RBP21.98■■□□□ 1.11
CLK3-202ENST00000395066 IVDP26440 423 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 ZNF568Q3ZCX4 644 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 CRELD2Q6UXH1 353 aaPredicted RBP21.98■■□□□ 1.11
CLK3-202ENST00000395066 TAOK1Q7L7X3 1001 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 ANKS1BQ7Z6G8 1248 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 CYP4X1Q8N118 509 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 TMEM174Q8WUU8 243 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 CEP170P1Q96L14 293 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 TBC1D22BQ9NU19 505 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 TCP11X1B4DZS4 312 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 CETPP11597 493 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 GBP2P32456 591 aaPredicted RBP21.98■■□□□ 1.11
CLK3-202ENST00000395066 MPP2Q14168 576 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 ZKSCAN8Q15776 578 aaPredicted RBP21.98■■□□□ 1.11
CLK3-202ENST00000395066 ACCSLQ4AC99 568 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 RHBDF2Q6PJF5 856 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 VSTM1Q6UX27 236 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 MCOLN2Q8IZK6 566 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 LARGE2Q8N3Y3 721 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms