RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MMGT1Q8N4V1 131 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 RUSC1Q9BVN2 902 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 ASCC2Q9H1I8 757 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 ZFYVE28Q9HCC9 887 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 AMFRQ9UKV5 643 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 MTUS1Q9ULD2 1270 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 TFR2Q9UP52 801 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 TUBGCP6Q96RT7 1819 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 UBE4BO95155 1302 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 CASQ2O14958 399 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 ATP5HO75947 161 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GH1P01241 217 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GSTA2P09210 222 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 KRT15P19012 456 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GJC1P36383 396 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RFC5P40937 340 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 PHKA2P46019 1235 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 KIF11P52732 1056 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 NPEPPSP55786 919 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 PSMC6P62333 389 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ZC2HC1CQ53FD0 456 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 WLSQ5T9L3 541 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 CENPPQ6IPU0 288 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RHPN2Q8IUC4 686 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 CYTH2Q99418 400 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 AP1M1Q9BXS5 423 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 CARD9Q9H257 536 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 DNAJC12Q9UKB3 198 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ASTN2O75129 1339 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 C10orf71Q711Q0 1435 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GLTPD2A6NH11 291 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 PGRMC1O00264 195 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 TNPO2O14787 897 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 RASGRF2O14827 1237 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 SUPT3HO75486 399 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RNF8O76064 485 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GYPCP04921 128 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GSTA1P08263 222 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MYL3P08590 195 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GHRP10912 638 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 CHN1P15882 459 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 GCLMP48507 274 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 EFNA5P52803 228 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 SNRPFP62306 86 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 TFAMQ00059 246 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 IL9RQ01113 521 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 LRRC14Q15048 493 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 C4orf19Q8IY42 314 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 CCDC105Q8IYK2 499 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 PPP1R14CQ8TAE6 165 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MDM1Q8TC05 714 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ZNF653Q96CK0 615 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MTMR8Q96EF0 704 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 FAM213AQ9BRX8 229 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RPF1Q9H9Y2 349 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 C17orf75Q9HAS0 396 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 THEGQ9P2T0 379 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 TSC22D4Q9Y3Q8 395 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 DAAM1Q9Y4D1 1078 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 USP15Q9Y4E8 981 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 PCDHB4Q9Y5E5 795 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 IKBKGQ9Y6K9 419 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MYPNQ86TC9 1320 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 LRRC53A6NM62 1247 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MAPK13O15264 365 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 LRRN2O75325 713 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 USP2O75604 605 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 TGFB3P10600 412 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ATF7P17544 494 aaPredicted RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 SFSWAPQ12872 951 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 LAMC2Q13753 1193 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 NPY5RQ15761 445 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 TTMPQ5BVD1 217 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 C6orf118Q5T5N4 469 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 TTI2Q6NXR4 508 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 DCUN1D2Q6PH85 259 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 OR6J1Q8NGC5 347 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MAGEC3Q8TD91 643 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 TMEM143Q96AN5 459 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 MRPL4Q9BYD3 311 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 PITPNM3Q9BZ71 974 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RBM12Q9NTZ6 932 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 PARP2Q9UGN5 583 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ASIC3Q9UHC3 531 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ANGPTL2Q9UKU9 493 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 AGTPBP1Q9UPW5 1226 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 SNED1Q8TER0 1413 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 ATXN2Q99700 1313 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 ARHGAP42A6NI28 874 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RSPH10B2B2RC85 870 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 EML1O00423 815 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 XPOTO43592 962 aaKnown RBP6.04□□□□□ -1.44
RFFL-202ENST00000394597 RASSF9O75901 435 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 PGK2P07205 417 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 RSPH10BP0C881 870 aa6.04□□□□□ -1.44
RFFL-202ENST00000394597 UBTFL6P0CB48 400 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms