RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 GOLPH3Q9H4A6 298 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 CHCHD3Q9NX63 227 aaKnown RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 TMEM59LQ9UK28 342 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 FLT1P17948 1338 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 EPHB6O15197 1021 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 STRNO43815 780 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 MAPTP10636 758 aaKnown RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 GTF2H1P32780 548 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 BASP1P80723 227 aaKnown RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 QPCTQ16769 361 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 C4orf22Q6V702 233 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 ARHGAP22Q7Z5H3 698 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 MTBPQ96DY7 904 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 WDR91A4D1P6 747 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 H7C0C1 242 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 CAPN9O14815 690 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 CAMTA2O94983 1202 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 CD19P15391 556 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 ATP5OP48047 213 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 STAT2P52630 851 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 IFI35P80217 286 aaPredicted RBP9.11□□□□□ -0.95
GABRA1-202ENST00000393943 DNAJC3Q13217 504 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 ACAD10Q6JQN1 1059 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 LVRNQ6Q4G3 990 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 NSMFQ6X4W1 530 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 SLFN11Q7Z7L1 901 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 LCA5Q86VQ0 697 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 PPP2R3CQ969Q6 453 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 SLC35C1Q96A29 364 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 BTBD10Q9BSF8 475 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 HAO1Q9UJM8 370 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 PCDHB2Q9Y5E7 798 aa9.11□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NPTXRO95502 500 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 PEX5P50542 639 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 PSMD7P51665 324 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 KIF22Q14807 665 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 Q4G0T1 1027 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 SPDYAQ5MJ70 313 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 IRF2BP2Q7Z5L9 587 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 LRRC57Q8N9N7 239 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 MCPH1Q8NEM0 835 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 COA1Q9GZY4 146 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 DDX39AO00148 427 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 TNNC2P02585 160 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 KPNA2P52292 529 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 HADHBP55084 474 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NFIL3Q16649 462 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 BMT2Q1RMZ1 405 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 PDZD4Q76G19 769 aaPredicted RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 ZC3H15Q8WU90 426 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 CMTM5Q96DZ9 223 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 SHOC2Q9UQ13 582 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 TLR3O15455 904 aaKnown RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 AKAP3O75969 853 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 FESP07332 822 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 TSHRP16473 764 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 MX2P20592 715 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 SFNP31947 248 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 GCLCP48506 637 aaPredicted RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NUDCD3Q8IVD9 361 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 OPTNQ96CV9 577 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 CDHR1Q96JP9 859 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 C9orf72Q96LT7 481 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 CPVLQ9H3G5 476 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 TMEM8AQ9HCN3 771 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NYAP2Q9P242 653 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 CCNL1Q9UK58 526 aaPredicted RBP9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NAALADL1Q9UQQ1 740 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 GPR75-ASB3A0A0A6YYF3 556 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 GMNNO75496 209 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 ALADP13716 330 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 CACNA2D1P54289 1103 aa9.1□□□□□ -0.95
GABRA1-202ENST00000393943 PDE1BQ01064 536 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms