RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
CHMP3-202ENST00000393773 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 CDY1Q9Y6F8 540 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 MYH11P35749 1972 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 SHISA7A6NL88 538 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 ACKR2O00590 384 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 LAMTOR5O43504 91 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 ATP2B1P20020 1258 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 CD72P21854 359 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 TARSP26639 723 aaKnown RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 NAMPTP43490 491 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 MAPK6Q16659 721 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 UVSSAQ2YD98 709 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 DCAF4L1Q3SXM0 396 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 GLRA4Q5JXX5 417 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 TPRG1Q6ZUI0 275 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 ZBTB44Q8NCP5 570 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 CLDN23Q96B33 292 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 KIFC3Q9BVG8 833 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 PRMT8Q9NR22 394 aaPredicted RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 GDAQ9Y2T3 454 aa16.95■□□□□ 0.3
CHMP3-202ENST00000393773 TPRP12270 2363 aaKnown RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 NUP210Q8TEM1 1887 aaPredicted RBP16.95■□□□□ 0.3
CHMP3-202ENST00000393773 ACACBO00763 2458 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 FAM170BA6NMN3 283 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 LILRB5O75023 590 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 ECI2O75521 394 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 CEBPBP17676 345 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 FCARP24071 287 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 CLCNKBP51801 687 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 RSPO4Q2I0M5 234 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-202ENST00000393773 RTL10Q7L3V2 364 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-202ENST00000393773 PLA2G2FQ9BZM2 168 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 EPC1Q9H2F5 836 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 GOLGA2P5Q9HBQ8 144 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
CHMP3-202ENST00000393773 TSC2P49815 1807 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 JAK2O60674 1132 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 B3GAT3O94766 335 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 RHOP08100 348 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 RPS9P46781 194 aaKnown RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 FOSBP53539 338 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 CSTF1Q05048 431 aaKnown RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 SOX4Q06945 474 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 ME3Q16798 604 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 UPP1Q16831 310 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 TMEM132AQ24JP5 1023 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 VARS2Q5ST30 1063 aaKnown RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 PADI6Q6TGC4 694 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 NCDNQ9UBB6 729 aa16.93■□□□□ 0.3
CHMP3-202ENST00000393773 SMG5Q9UPR3 1016 aaKnown RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 MRPS23Q9Y3D9 190 aaKnown RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 KIF26AQ9ULI4 1882 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-202ENST00000393773 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 I3L4J1 428 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 LIG1P18858 919 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 CYP11B2P19099 503 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 ROR1Q01973 937 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 FZD5Q13467 585 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 PRSS36Q5K4E3 855 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 ZBTB41Q5SVQ8 909 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 NT5DC1Q5TFE4 455 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 UROC1Q96N76 676 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 HEBP1Q9NRV9 189 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
CHMP3-202ENST00000393773 RALGAPA1Q6GYQ0 2036 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ANK1P16157 1881 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 WDR27A2RRH5 827 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 NRG2O14511 850 aaPredicted RBP16.91■□□□□ 0.3
CHMP3-202ENST00000393773 TDGF1P13385 188 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 RPA1P27694 616 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 MCM7P33993 719 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 BRCC3P46736 316 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ATF7IP2Q5U623 682 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 CEP120Q8N960 986 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 ELSPBP1Q96BH3 223 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 MCRS1Q96EZ8 462 aa16.91■□□□□ 0.3
CHMP3-202ENST00000393773 CHD8Q9HCK8 2581 aa16.9■□□□□ 0.3
CHMP3-202ENST00000393773 ARHGEF35A5YM69 484 aa16.9■□□□□ 0.3
CHMP3-202ENST00000393773 ABLIM3O94929 683 aa16.9■□□□□ 0.3
CHMP3-202ENST00000393773 ANAPC15P60006 121 aa16.9■□□□□ 0.3
CHMP3-202ENST00000393773 XKR4Q5GH76 650 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms