RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KRT5P13647 590 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
TDP1-203ENST00000393454 TRPC3Q13507 836 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 NCOA4Q13772 614 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 KCNA10Q16322 511 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 ZNF662Q6ZS27 426 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 APBB1IPQ7Z5R6 666 aaPredicted RBP9.31□□□□□ -0.92
TDP1-203ENST00000393454 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
TDP1-203ENST00000393454 ERO1AQ96HE7 468 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 ANKRD36BP1Q96IX9 119 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 MTMR12Q9C0I1 747 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 UQCRHLA0A096LP55 91 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 A0A1B0GUA9 196 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 CTAGE9A4FU28 777 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 LACTBL1A8MY62 500 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 FANCGO15287 622 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 CYP26A1O43174 497 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 FKTNO75072 461 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ADAMTS4O75173 837 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 NPTXRO95502 500 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ASGR1P07306 291 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 UQCRHP07919 91 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ANXA13P27216 316 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 ARHGEF6Q15052 776 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 C10orf76Q5T2E6 689 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ALKBH5Q6P6C2 394 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 ENOSF1Q7L5Y1 443 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 GLYCTKQ8IVS8 523 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 NME8Q8N427 588 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 FAM81BQ96LP2 452 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ACAP3Q96P50 834 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 AGPAT1Q99943 283 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 NAGPAQ9UK23 515 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 FAM170AA1A519 330 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 TMCO5BA8MYB1 307 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 M0QZ92 97 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.925e-8■■□□□ 12.6
TDP1-203ENST00000393454 PJA2O43164 708 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 SGPL1O95470 568 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 CST3P01034 146 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 GNRH1P01148 92 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 KRT19P08727 400 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 EIF4BP23588 611 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 CRYBB1P53674 252 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 GCNT1Q02742 428 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 SNX17Q15036 470 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 NAB2Q15742 525 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 KYAT1Q16773 422 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 TAF3Q5VWG9 929 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 TAF2Q6P1X5 1199 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 FAM71AQ8IYT1 594 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 PCSK9Q8NBP7 692 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 MYRIPQ8NFW9 859 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 LNX1Q8TBB1 728 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 SHC3Q92529 594 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 PACSIN1Q9BY11 444 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 DDX20Q9UHI6 824 aaKnown RBP9.3□□□□□ -0.92
TDP1-203ENST00000393454 GTF2IRD1Q9UHL9 959 aa9.3□□□□□ -0.92
TDP1-203ENST00000393454 BUB1O43683 1085 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 B4GALT4O60513 344 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 TACC1O75410 805 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 MOCS3O95396 460 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 HOXA11P31270 313 aaPredicted RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 MYL6P60660 151 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 PCBP1Q15365 356 aaKnown RBP eCLIP9.29□□□□□ -0.92
TDP1-203ENST00000393454 DCAF4L1Q3SXM0 396 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 JADE1Q6IE81 842 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 NOTUMQ6P988 496 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 RNF180Q86T96 592 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 RSPH3Q86UC2 560 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 DNAAF5Q86Y56 855 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 EFCAB13Q8IY85 973 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 RPUSD2Q8IZ73 545 aaKnown RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 KLHDC9Q8NEP7 349 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 ARID3AQ99856 593 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
TDP1-203ENST00000393454 NUB1Q9Y5A7 615 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 ANK1P16157 1881 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
TDP1-203ENST00000393454 NFICP08651 508 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 H2AFZP0C0S5 128 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 HOXC8P31273 242 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 TERF1P54274 439 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 MRPS6P82932 125 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 CUL2Q13617 745 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 SGSM1Q2NKQ1 1148 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms