RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 PPP2R5BQ15173 497 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 STXBP2Q15833 593 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 LDLRAP1Q5SW96 308 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TIGD3Q6B0B8 471 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 SCARA5Q6ZMJ2 495 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 H2AFVQ71UI9 128 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TMC2Q8TDI7 906 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 S100ZQ8WXG8 99 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 PIGKQ92643 395 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 KCNB2Q92953 911 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 DGCR14Q96DF8 476 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 CCDC51Q96ER9 411 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 RANBP17Q9H2T7 1088 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 SLC12A5Q9H2X9 1139 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 PCIF1Q9H4Z3 704 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 FBRSQ9HAH7 460 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TMEM138Q9NPI0 162 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 AVENQ9NQS1 362 aaPredicted RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 PANK4Q9NVE7 773 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TBC1D24Q9ULP9 559 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 C2orf71A6NGG8 1288 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 KPNA5O15131 536 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 PFDN6O15212 129 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 ZNF432O94892 652 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 CCDC130P13994 396 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 JAK1P23458 1154 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 MARK3P27448 753 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 MAZP56270 477 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 TUBA1BP68363 451 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 GTF2H3Q13889 308 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 NFYCQ13952 458 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TAF1BQ53T94 588 aaPredicted RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 WLSQ5T9L3 541 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 C1orf189Q5VU69 101 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 CENPUQ71F23 418 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TUBA1AQ71U36 451 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 ILDR1Q86SU0 546 aaPredicted RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 DIS3L2Q8IYB7 885 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 ULK2Q8IYT8 1036 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 ANKRD44Q8N8A2 993 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 OR8H1Q8NGG4 311 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 TTC8Q8TAM2 541 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 PNPT1Q8TCS8 783 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 MMTAG2Q9BU76 263 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN5AQ9BUG6 496 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 GSDMCQ9BYG8 508 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 KDM4CQ9H3R0 1056 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 MARCH7Q9H992 704 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 VPS54Q9P1Q0 977 aa3.44□□□□□ -1.86
PHF3-202ENST00000393387 ARMCX3Q9UH62 379 aaPredicted RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 MRPS23Q9Y3D9 190 aaKnown RBP3.44□□□□□ -1.86
PHF3-202ENST00000393387 INSRP06213 1382 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SLC27A2O14975 620 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 VIL1P09327 827 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 ATF3P18847 181 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PHKA1P46020 1223 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ATP8B2P98198 1209 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 HSF2Q03933 536 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 IL18R1Q13478 541 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SEMA3AQ14563 771 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C2orf76Q3KRA6 126 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SLC9A4Q6AI14 798 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TUBA3EQ6PEY2 450 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 FOXR1Q6PIV2 292 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 AFTPHQ6ULP2 937 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TRPM8Q7Z2W7 1104 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C11orf96Q7Z7L8 435 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ZNF280BQ86YH2 543 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SAMD3Q8N6K7 520 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 MINDY2Q8NBR6 621 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GIPC3Q8TF64 312 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GATAD2BQ8WXI9 593 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DHX38Q92620 1227 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 DPF1Q92782 380 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 BHMTQ93088 406 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EGFL8Q99944 293 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 YIPF2Q9BWQ6 316 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RHOBTB2Q9BYZ6 727 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ARMC7Q9H6L4 198 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KRT84Q9NSB2 600 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KLHL11Q9NVR0 708 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CYTH4Q9UIA0 394 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 LCMT1Q9UIC8 334 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 AP4S1Q9Y587 144 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SOGA1O94964 1423 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CLIC2O15247 247 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PRMT3O60678 531 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 FDPSP14324 419 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 NQO1P15559 274 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 NELFEP18615 380 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 ATP6V1B2P21281 511 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SKIV2L2P42285 1042 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 RPL35P42766 123 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 NT5C2P49902 561 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 NUDT2P50583 147 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 IL5RAQ01344 420 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DDX39BQ13838 428 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms