RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CNTN6Q9UQ52 1028 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 STX10O60499 249 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 SKILP12757 684 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CREBRFQ8IUR6 639 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CCDC150Q8NCX0 1101 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 PTGESO14684 152 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 NBNO60934 754 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 TMOD1P28289 359 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CLCN1P35523 988 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 GRM5P41594 1212 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 LBX1P52954 281 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 SOX4Q06945 474 aaPredicted RBP11.7□□□□□ -0.54
PDGFD-202ENST00000393158 EXOC3L4Q17RC7 722 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 RNF180Q86T96 592 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 GPIHBP1Q8IV16 184 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CCDC127Q96BQ5 260 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 SNX27Q96L92 541 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 WNT8AQ9H1J5 351 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 RNF19AQ9NV58 838 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CNTN3Q9P232 1028 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF233A6NK53 670 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ESPNB1AK53 854 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ARVCFO00192 962 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 B4GALT3O60512 393 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 KRT9P35527 623 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 POU5F1Q01860 360 aaKnown RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF568Q3ZCX4 644 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 CD300LGQ6UXG3 332 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ANKRD33Q7Z3H0 272 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 SYN2Q92777 582 aaPredicted RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 EDEM3Q9BZQ6 932 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 NUB1Q9Y5A7 615 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 PPEF2O14830 753 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ZEB2O60315 1214 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 PCBP1Q15365 356 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 PRKCIP41743 596 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ASPAP45381 313 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 POLR2FP61218 127 aaKnown RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 MYL7Q01449 175 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 FAAP100Q0VG06 881 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 TRIM14Q14142 442 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 WDR49Q8IV35 697 aa11.69□□□□□ -0.54
PDGFD-202ENST00000393158 BAG1Q99933 345 aaPredicted RBP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDGFD-202ENST00000393158 CABYRO75952 493 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 CALCAP01258 141 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 CHRNB2P17787 502 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF132P52740 706 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 FILIP1LQ4L180 1135 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 KRT39Q6A163 491 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 SDCBP2Q9H190 292 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 KIAA1586Q9HCI6 787 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ST3GAL5Q9UNP4 418 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF638Q14966 1978 aaKnown RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 SHC3Q92529 594 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 BICD1Q96G01 975 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 FOXN3O00409 490 aaPredicted RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 ASS1P00966 412 aaKnown RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 SLC9C1Q4G0N8 1177 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 LNX1Q8TBB1 728 aaPredicted RBP11.68□□□□□ -0.54
PDGFD-202ENST00000393158 MAP7D2Q96T17 732 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 IPPQ9Y573 584 aa11.68□□□□□ -0.54
PDGFD-202ENST00000393158 INPPL1O15357 1258 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 EVI5O60447 810 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 SGPL1O95470 568 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 CFHP08603 1231 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 DLATP10515 647 aaKnown RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 OSTNP61366 133 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 DNAAF5Q86Y56 855 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms