RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 FAM114A2Q9NRY5 505 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 PCDHA3Q9Y5H8 950 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 PTPRJQ12913 1337 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 ZBTB42B2RXF5 422 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 CYP1A1P04798 512 aaPredicted RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 EDN1P05305 212 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 PGK2P07205 417 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 TBXAS1P24557 533 aaPredicted RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 LMAN1P49257 510 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 BIRC3Q13489 604 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 CUL2Q13617 745 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 DHX34Q14147 1143 aaKnown RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 GPAT2Q6NUI2 795 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 TRIM72Q6ZMU5 477 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 BRSK2Q8IWQ3 736 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 PIK3R5Q8WYR1 880 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 KRT35Q92764 455 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 RUFY1Q96T51 708 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 MRPL4Q9BYD3 311 aaKnown RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 UTP11Q9Y3A2 253 aaKnown RBP15.32■□□□□ 0.04
MKS1-203ENST00000393120 NR2E1Q9Y466 385 aa15.32■□□□□ 0.04
MKS1-203ENST00000393120 LRRC37A2A6NM11 1700 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 CLDN3O15551 220 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 FAM189A1O60320 539 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 DRG2P55039 364 aaKnown RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 PPP1R2P3Q6NXS1 205 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 GLG1Q92896 1179 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 LRRC45Q96CN5 670 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 OPTNQ96CV9 577 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ZIM3Q96PE6 472 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 RAB17Q9H0T7 212 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 PLEKHA4Q9H4M7 779 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ANKFY1Q9P2R3 1169 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 CNOT8Q9UFF9 292 aaKnown RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 GOLGA6CA6NDK9 693 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 TTI1O43156 1089 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 GOLGA6DP0CG33 693 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 CHRNA3P32297 505 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 GUCY2FP51841 1108 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 CENPCQ03188 943 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 LAMTOR4Q0VGL1 99 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ZNF211Q13398 564 aaPredicted RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 DRP2Q13474 957 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 HLTFQ14527 1009 aaKnown RBP eCLIP15.31■□□□□ 0.04
MKS1-203ENST00000393120 SURF1Q15526 300 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 C9orf131Q5VYM1 1079 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 LRIG3Q6UXM1 1119 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 MOB2Q70IA6 237 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ARMC9Q7Z3E5 817 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 WDR49Q8IV35 697 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 FAM76AQ8TAV0 307 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 GTF3C2Q8WUA4 911 aaPredicted RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 ZBTB9Q96C00 473 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 VCPIP1Q96JH7 1222 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 PKNOX2Q96KN3 472 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ACO2Q99798 780 aaKnown RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
MKS1-203ENST00000393120 GOLGA6AQ9NYA3 693 aa15.31■□□□□ 0.04
MKS1-203ENST00000393120 ATMINO43313 823 aaPredicted RBP15.3■□□□□ 0.04
MKS1-203ENST00000393120 CLTAP09496 248 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 DR1Q01658 176 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 MCL1Q07820 350 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 TTLL12Q14166 644 aaPredicted RBP15.3■□□□□ 0.04
MKS1-203ENST00000393120 PLCB4Q15147 1175 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 SEL1L2Q5TEA6 688 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 ZBTB8OSQ8IWT0 167 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
MKS1-203ENST00000393120 SMARCAD1Q9H4L7 1026 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
MKS1-203ENST00000393120 ASB14A6NK59 587 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ABLIM1O14639 778 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 SPOPO43791 374 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 PHF2O75151 1096 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 CAPN2P17655 700 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 EPHX2P34913 555 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ACTN2P35609 894 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 SLC1A1P43005 524 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 RWDD2BP57060 319 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 MAPK6Q16659 721 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 DUPD1Q68J44 220 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 SPATA33Q96N06 139 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms