RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 C22orf31O95567 290 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 EFCAB12Q6NXP0 572 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 TSHZ1Q6ZSZ6 1077 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 GPR142Q7Z601 462 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 ZNF677Q86XU0 584 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 RHPN2Q8IUC4 686 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 WDR49Q8IV35 697 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 USP38Q8NB14 1042 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 FZD8Q9H461 694 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 GOLPH3Q9H4A6 298 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 SMARCAL1Q9NZC9 954 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 ACKR2O00590 384 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 ABLIM1O14639 778 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 MAGEB2O15479 319 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 PROZP22891 400 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 MAPK4P31152 587 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 PLA2G4AP47712 749 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 DNA2P51530 1060 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 LMBRD2Q68DH5 695 aaPredicted RBP21.56■■□□□ 1.04
PTPN11-202ENST00000392597 C11orf63Q6NUN7 778 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 LRRC1Q9BTT6 524 aa21.56■■□□□ 1.04
PTPN11-202ENST00000392597 ZNF236Q9UL36 1845 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 ALDH1A1P00352 501 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 MMEP08473 750 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 PTENP60484 403 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 TAF3Q5VWG9 929 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 RASGEF1CQ8N431 466 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 TRAPPC12Q8WVT3 735 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 TCHPQ9BT92 498 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 RNPEPQ9H4A4 650 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 TMEM59LQ9UK28 342 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 PCDHB2Q9Y5E7 798 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 ZSWIM8A7E2V4 1837 aa21.55■■□□□ 1.04
PTPN11-202ENST00000392597 TTLL13PA6NNM8 815 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 PPFIA4O75335 1185 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 SNAI1O95863 264 aaPredicted RBP21.54■■□□□ 1.04
PTPN11-202ENST00000392597 KRT5P13647 590 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 TBXAS1P24557 533 aaPredicted RBP21.54■■□□□ 1.04
PTPN11-202ENST00000392597 C8orf74Q6P047 294 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 MPZL3Q6UWV2 235 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 CCNI2Q6ZMN8 369 aaPredicted RBP21.54■■□□□ 1.04
PTPN11-202ENST00000392597 PLEKHH3Q7Z736 793 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 DPP9Q86TI2 863 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 METTL13Q8N6R0 699 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 PTPRHQ9HD43 1115 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 STIM2Q9P246 746 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 EVPLQ92817 2033 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 PGRMC1O00264 195 aaKnown RBP21.54■■□□□ 1.04
PTPN11-202ENST00000392597 TNFRSF8P28908 595 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 CUL2Q13617 745 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 UBXN6Q9BZV1 441 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 CTTNBP2NLQ9P2B4 639 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 GTF3C4Q9UKN8 822 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 TTC7AQ9ULT0 858 aaPredicted RBP21.54■■□□□ 1.04
PTPN11-202ENST00000392597 COG5Q9UP83 839 aa21.54■■□□□ 1.04
PTPN11-202ENST00000392597 CYP1A2P05177 515 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 HOXD8P13378 290 aaPredicted RBP21.53■■□□□ 1.04
PTPN11-202ENST00000392597 INSRRP14616 1297 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 CLCN3P51790 818 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 TNNC1P63316 161 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 FAM187BQ17R55 369 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 IFNLR1Q8IU57 520 aaPredicted RBP21.53■■□□□ 1.04
PTPN11-202ENST00000392597 LINC01465Q8N7H1 131 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 AFG1LQ8WV93 481 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 MAML3Q96JK9 1138 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 NLRP4Q96MN2 994 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.53■■□□□ 1.041e-6■□□□□ 8.5
PTPN11-202ENST00000392597 ACP6Q9NPH0 428 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 CPSF3Q9UKF6 684 aaKnown RBP21.53■■□□□ 1.04
PTPN11-202ENST00000392597 CNTN6Q9UQ52 1028 aa21.53■■□□□ 1.04
PTPN11-202ENST00000392597 SLC15A5A6NIM6 579 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 CEP104O60308 925 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 CLTAP09496 248 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 HARSP12081 509 aaKnown RBP21.52■■□□□ 1.04
PTPN11-202ENST00000392597 ADCYAP1R1P41586 468 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 PHKA2P46019 1235 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 MBTD1Q05BQ5 628 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 NCOA4Q13772 614 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 TAF1CQ15572 869 aaPredicted RBP21.52■■□□□ 1.04
PTPN11-202ENST00000392597 CLEC16AQ2KHT3 1053 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 GJC2Q5T442 439 aaPredicted RBP21.52■■□□□ 1.04
PTPN11-202ENST00000392597 ATF7IP2Q5U623 682 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 ACAD10Q6JQN1 1059 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 ZBTB33Q86T24 672 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 FAM84AQ96KN4 292 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 IMPG2Q9BZV3 1241 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 ABHD16BQ9H3Z7 469 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 UVRAGQ9P2Y5 699 aa21.52■■□□□ 1.04
PTPN11-202ENST00000392597 MIF4GDA9UHW6 222 aaKnown RBP21.52■■□□□ 1.03
PTPN11-202ENST00000392597 PHACTR2O75167 634 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 ACO1P21399 889 aaKnown RBP21.52■■□□□ 1.03
PTPN11-202ENST00000392597 TNFSF9P41273 254 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 NOP14P78316 857 aaKnown RBP21.52■■□□□ 1.03
PTPN11-202ENST00000392597 IRF5Q13568 498 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 CLUL1Q15846 466 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 DUSP28Q4G0W2 176 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 CARD9Q9H257 536 aa21.52■■□□□ 1.03
PTPN11-202ENST00000392597 PRMT7Q9NVM4 692 aaPredicted RBP21.52■■□□□ 1.03
PTPN11-202ENST00000392597 SLC5A4Q9NY91 659 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms