RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 AUTS2Q8WXX7 1259 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 KLHL5Q96PQ7 755 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
GGPS1-203ENST00000391855 MSTO1Q9BUK6 570 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 STRA6Q9BX79 667 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 TRIM9Q9C026 710 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 RXFP1Q9HBX9 757 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 A0A0B4J269 797 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 POLR2DO15514 142 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 GCNT3O95395 438 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 RPL9P32969 192 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 ASIC1P78348 528 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CLUL1Q15846 466 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 SLC10A6Q3KNW5 377 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 KIAA0319Q5VV43 1072 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 C7orf25Q9BPX7 421 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 GPR62Q9BZJ7 368 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 FNIP2Q9P278 1114 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 STYXL1Q9Y6J8 313 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 B3GAT3O94766 335 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CXCL8P10145 99 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CYP3A5P20815 502 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CMA1P23946 247 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 KLRC2P26717 231 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 ITIH3Q06033 890 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 SLC39A4Q6P5W5 647 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 ADHFE1Q8IWW8 467 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 PIK3R5Q8WYR1 880 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 ZMAT2Q96NC0 199 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 HAPLN2Q9GZV7 340 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
GGPS1-203ENST00000391855 UBQLN1Q9UMX0 589 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 TCF20Q9UGU0 1960 aaKnown RBP13.81□□□□□ -0.2
GGPS1-203ENST00000391855 PDCD11Q14690 1871 aaKnown RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 F8W810 466 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 C2CD2LO14523 706 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 KIAA0391O15091 583 aaKnown RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 FAM189A1O60320 539 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 ADRB2P07550 413 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 CLCNKBP51801 687 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 UPP1Q16831 310 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 FAM171A1Q5VUB5 890 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 CES5AQ6NT32 575 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 RIN2Q8WYP3 895 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 SUSD6Q92537 303 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 DERAQ9Y315 318 aa13.8□□□□□ -0.2
GGPS1-203ENST00000391855 USP15Q9Y4E8 981 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-203ENST00000391855 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 UBE4BO95155 1302 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 PODXLO00592 558 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
GGPS1-203ENST00000391855 TEX28O15482 410 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
GGPS1-203ENST00000391855 GLUD1P00367 558 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 MYL1P05976 194 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 SLFN14P0C7P3 912 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 GARTP22102 1010 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 PAX3P23760 479 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
GGPS1-203ENST00000391855 CLCN4P51793 760 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
GGPS1-203ENST00000391855 ZP2Q05996 745 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
GGPS1-203ENST00000391855 SEZ6Q53EL9 994 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 TAS1R1Q7RTX1 841 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 GJD3Q8N144 294 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 STAMQ92783 540 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 FBXL18Q96ME1 805 aa13.79□□□□□ -0.2
GGPS1-203ENST00000391855 ASB7Q9H672 318 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms