RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 C17orf80Q9BSJ5 609 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 MXD3Q9BW11 206 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 HEY2Q9UBP5 337 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 LOC100653049A0A140TA62 436 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 LINC00854A0A1B0GVQ3 168 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 KRT34O76011 436 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 MAGEA4P43358 317 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 LAYNQ6UX15 382 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 SCUBE1Q8IWY4 988 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 ULK4Q96C45 1275 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 A0A1B0GW55 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 PSAPP07602 524 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L2P0CJ85 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L3P0CJ86 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L4P0CJ87 422 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L5P0CJ88 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L6P0CJ89 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4L7P0CJ90 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 NUDT2P50583 147 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 IYDQ6PHW0 289 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 KCNB2Q92953 911 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 DUX4Q9UBX2 424 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 GADL1Q6ZQY3 521 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 PPHLN1Q8NEY8 458 aaKnown RBP16.99■□□□□ 0.31
SHANK1-204ENST00000391814 ALDH8A1Q9H2A2 487 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-204ENST00000391814 XPOTO43592 962 aaKnown RBP16.99■□□□□ 0.31
SHANK1-204ENST00000391814 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 TRAPPC11Q7Z392 1133 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 MFN1Q8IWA4 741 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 L2HGDHQ9H9P8 463 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 COPAP53621 1224 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 ZNF699Q32M78 642 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 OLFML1Q6UWY5 402 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 PATL1Q86TB9 770 aaKnown RBP16.99■□□□□ 0.31
SHANK1-204ENST00000391814 SCN3BQ9NY72 215 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
SHANK1-204ENST00000391814 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
SHANK1-204ENST00000391814 KRT7P08729 469 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 KCNMA1Q12791 1236 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 MXD4Q14582 209 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-204ENST00000391814 PCDHA6Q9UN73 950 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 PCDHA8Q9Y5H6 950 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 E5RI56 91 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 H0YIN7 160 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 UBOX5O94941 541 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 OCM2P0CE71 109 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 OCMP0CE72 109 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-204ENST00000391814 KRT33BQ14525 404 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 SURF1Q15526 300 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 IFNEQ86WN2 208 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 TUBGCP3Q96CW5 907 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 EPAS1Q99814 870 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ANKZF1Q9H8Y5 726 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 SYBUQ9NX95 663 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 AP4S1Q9Y587 144 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ARHGAP31Q2M1Z3 1444 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 CLPTM1O96005 669 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 MYL2P10916 166 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 MCAMP43121 646 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 GALCP54803 685 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 EMSYQ7Z589 1322 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 WDR17Q8IZU2 1322 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 CPVLQ9H3G5 476 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 ZBTB39O15060 712 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 IFNA8P32881 189 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 KCTD21Q4G0X4 260 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 FAM180AQ6UWF9 173 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 PLEKHM3Q6ZWE6 761 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 RCOR2Q8IZ40 523 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 CPA5Q8WXQ8 436 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 LZICQ8WZA0 190 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 TYW5A2RUC4 315 aaKnown RBP16.98■□□□□ 0.31
SHANK1-204ENST00000391814 FRMD5Q7Z6J6 570 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 RIN3Q8TB24 985 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 EXOSC4Q9NPD3 245 aaKnown RBP16.98■□□□□ 0.31
SHANK1-204ENST00000391814 LAMC1P11047 1609 aa16.98■□□□□ 0.31
SHANK1-204ENST00000391814 WEE2P0C1S8 567 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 PRELPP51888 382 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 PGBD4Q96DM1 585 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 ELMO2Q96JJ3 720 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 KANSL2Q9H9L4 492 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 RFC5P40937 340 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 OTUD4Q01804 1114 aaKnown RBP16.97■□□□□ 0.31
SHANK1-204ENST00000391814 MOSPD1Q9UJG1 213 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 FOXP2O15409 715 aa16.97■□□□□ 0.31
SHANK1-204ENST00000391814 STX19Q8N4C7 294 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms