RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ZBTB5O15062 677 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 UBTFL6P0CB48 400 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 PPM1FP49593 454 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 SLC13A1Q9BZW2 595 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 C15orf41Q9Y2V0 281 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 COL5A2P05997 1499 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 CCDC195A0A1B0GUA6 201 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 ARHGDIAP52565 204 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 TBCCQ15814 346 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 ADRM1Q16186 407 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 CMTM5Q96DZ9 223 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 OSBPL8Q9BZF1 889 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 ASNSD1Q9NWL6 643 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 GGA2Q9UJY4 613 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 MEGF6O75095 1541 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 SLC26A4O43511 780 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 KRT4P19013 534 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 IL10P22301 178 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 KIF19Q2TAC6 998 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 ACBD5Q5T8D3 534 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 FAM193BQ96PV7 902 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 LZICQ8WZA0 190 aa20.78■□□□□ 0.92
SHANK1-203ENST00000391813 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 NXF1Q9UBU9 619 aaKnown RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 CD58P19256 250 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PSMC1P62191 440 aaKnown RBP20.77■□□□□ 0.92
SHANK1-203ENST00000391813 LRRN4CLQ8ND94 238 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 DDI1Q8WTU0 396 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 DDX20Q9UHI6 824 aaKnown RBP20.77■□□□□ 0.92
SHANK1-203ENST00000391813 ZNF18P17022 549 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 TBXAS1P24557 533 aaPredicted RBP20.77■□□□□ 0.92
SHANK1-203ENST00000391813 DSG1Q02413 1049 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 CDKAL1Q5VV42 579 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PKD2L2Q9NZM6 624 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 DAGLAQ9Y4D2 1042 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PDHBP11177 359 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 HSPA13P48723 471 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 FNTAP49354 379 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 TAP1Q03518 808 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PDIA6Q15084 440 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 RCN1Q15293 331 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PBXIP1Q96AQ6 731 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 CELF4Q9BZC1 486 aaKnown RBP20.77■□□□□ 0.92
SHANK1-203ENST00000391813 PALMDQ9NP74 551 aa20.77■□□□□ 0.92
SHANK1-203ENST00000391813 SPAG6O75602 509 aa20.77■□□□□ 0.91
SHANK1-203ENST00000391813 CYP2D6P10635 497 aa20.77■□□□□ 0.91
SHANK1-203ENST00000391813 MAPK7Q13164 816 aa20.77■□□□□ 0.91
SHANK1-203ENST00000391813 HP1BP3Q5SSJ5 553 aaPredicted RBP20.77■□□□□ 0.91
SHANK1-203ENST00000391813 C4orf33Q8N1A6 199 aa20.77■□□□□ 0.91
SHANK1-203ENST00000391813 ANGPTL3Q9Y5C1 460 aa20.77■□□□□ 0.91
SHANK1-203ENST00000391813 ALDH18A1P54886 795 aaKnown RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 PEX3P56589 373 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 STX3Q13277 289 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 LRRC36Q1X8D7 754 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 PREPLQ4J6C6 727 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 SCG3Q8WXD2 468 aaKnown RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 SCHIP1Q9P0W5 487 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 MAP4P27816 1152 aaKnown RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 ANTXR2P58335 489 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 FBXO33Q7Z6M2 555 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 RHPN2Q8IUC4 686 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 KIAA2013Q8IYS2 634 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 HSPH1Q92598 858 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 APEX2Q9UBZ4 518 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 NEU2Q9Y3R4 380 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 CAPN6Q9Y6Q1 641 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L15C9J2P7 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L13C9JLJ4 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L11C9JVI0 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L18D6R9N7 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L22D6RA61 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L17D6RBQ6 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L19D6RCP7 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L20D6RJB6 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 RARGP13631 454 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 USP17L24Q0WX57 530 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 CEP55Q53EZ4 464 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 LACRTQ9GZZ8 138 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 NGRNQ9NPE2 291 aaKnown RBP20.76■□□□□ 0.91
SHANK1-203ENST00000391813 PSAPP07602 524 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 IGBP1P78318 339 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 FUKQ8N0W3 1084 aa20.76■□□□□ 0.91
SHANK1-203ENST00000391813 BBS5Q8N3I7 341 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 ACTRT1Q8TDG2 376 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 EME1Q96AY2 570 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 OTUD5Q96G74 571 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 MAGEB18Q96M61 343 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 PCDHA6Q9UN73 950 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 PCDHA8Q9Y5H6 950 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 E2F6O75461 281 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 TYK2P29597 1187 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 MAGEA4P43358 317 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 UBXN2AP68543 259 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 FAM151AQ8WW52 585 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 ACAP3Q96P50 834 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 C10orf88Q9H8K7 445 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 SLC9A2Q9UBY0 812 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 TAF6LQ9Y6J9 622 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 FAM205CA6NFA0 338 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms