RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 KNOP1Q1ED39 458 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TSNAXIP1Q2TAA8 658 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CBWD6Q4V339 395 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 EPC2Q52LR7 807 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CBWD3Q5JTY5 395 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CBWD5Q5RIA9 395 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 SNX30Q5VWJ9 437 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CES4AQ5XG92 561 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TRIM68Q6AZZ1 485 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PPP1R18Q6NYC8 613 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CCDC137Q6PK04 289 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MOXD1Q6UVY6 613 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 FAM47EQ6ZV65 393 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 SH2D5Q6ZV89 423 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 C16orf86Q6ZW13 317 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 OTUD6AQ7L8S5 288 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NLRP9Q7RTR0 991 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ZNF804AQ7Z570 1209 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ANKS1BQ7Z6G8 1248 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ADAT2Q7Z6V5 191 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CLNKQ7Z7G1 428 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ADGRG6Q86SQ4 1221 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NOP9Q86U38 636 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 LONP2Q86WA8 852 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 GPBP1Q86WP2 473 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MYLK4Q86YV6 388 aaPredicted RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CCDC125Q86Z20 511 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CCDC65Q8IXS2 484 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ANKRD42Q8N9B4 389 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 FBXO27Q8NI29 283 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 GDAP1Q8TB36 358 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 SHKBP1Q8TBC3 707 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ETNPPLQ8TBG4 499 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MGARPQ8TDB4 240 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 LRRC8CQ8TDW0 803 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PWWP2AQ96N64 755 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NR1H4Q96RI1 486 aaPredicted RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TUBGCP5Q96RT8 1024 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PIGSQ96S52 555 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NAP1L3Q99457 506 aaPredicted RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NDNQ99608 321 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 REEP2Q9BRK0 252 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MKNK1Q9BUB5 465 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 SPATA16Q9BXB7 569 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 STK33Q9BYT3 514 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CRNKL1Q9BZJ0 848 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TRIM7Q9C029 511 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 DCLK3Q9C098 648 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TANGO6Q9C0B7 1094 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 THAP2Q9H0W7 228 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ASCC2Q9H1I8 757 aaPredicted RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 IKZF4Q9H2S9 585 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MMADHCQ9H3L0 296 aaPredicted RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 KCNK13Q9HB14 408 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MKNK2Q9HBH9 465 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PREBQ9HCU5 417 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 C6orf50Q9HD87 102 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CHST7Q9NS84 486 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TYW1Q9NV66 732 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 DNAAF2Q9NVR5 837 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 TBC1D7Q9P0N9 293 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CNTN3Q9P232 1028 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PDP2Q9P2J9 529 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 STOML1Q9UBI4 398 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 MTRF1LQ9UGC7 380 aaKnown RBP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 RASAL2Q9UJF2 1139 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 USP21Q9UK80 565 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 BLOC1S6Q9UL45 172 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 NIP7Q9Y221 180 aaKnown RBP eCLIP3.68□□□□□ -1.82
TRAV39-201ENST00000390466 ALG6Q9Y672 507 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 GMEB1Q9Y692 573 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 CLUHO75153 1309 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 UBE4BO95155 1302 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 PASKQ96RG2 1323 aa3.68□□□□□ -1.82
TRAV39-201ENST00000390466 COL11A2P13942 1736 aaPredicted RBP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 TSPY2A6NKD2 308 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 FAM196BA6NMK8 535 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 CAPN14A8MX76 684 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 BTBD19C9JJ37 291 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 E5RJQ4 531 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 H0Y3Z8 333 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 EML1O00423 815 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 EIF3DO15371 548 aaKnown RBP eCLIP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 GRIN3BO60391 1043 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 HNRNPCL1O60812 293 aaKnown RBP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 CDH16O75309 829 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 LRRN2O75325 713 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 LGR5O75473 907 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 DCTN3O75935 186 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 STARD3NLO95772 234 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 LMNAP02545 664 aaKnown RBP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 ASLP04424 464 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 ITGA2BP08514 1039 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 GOLGA8HP0CJ92 632 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 XRCC5P13010 732 aaKnown RBP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 COMTP21964 271 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 RPL13P26373 211 aaKnown RBP3.67□□□□□ -1.82
TRAV39-201ENST00000390466 MARK3P27448 753 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 CRABP2P29373 138 aa3.67□□□□□ -1.82
TRAV39-201ENST00000390466 GNA11P29992 359 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms