RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 RAD51AP2Q09MP3 1159 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 RAB33AQ14088 237 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 UPP1Q16831 310 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
TRAV4-201ENST00000390426 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 ITFG1Q8TB96 612 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 SLC7A14Q8TBB6 771 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 TMX3Q96JJ7 454 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
TRAV4-201ENST00000390426 UROC1Q96N76 676 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 PNMA5Q96PV4 448 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 TCHPQ9BT92 498 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 PTPRHQ9HD43 1115 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 TOPORSQ9NS56 1045 aaPredicted RBP11.74□□□□□ -0.53
TRAV4-201ENST00000390426 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 MTRRQ9UBK8 725 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 WNT16Q9UBV4 365 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
TRAV4-201ENST00000390426 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
TRAV4-201ENST00000390426 ANHXE9PGG2 379 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 H3BQV1 296 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ST18O60284 1047 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 XYLBO75191 536 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 CENPBP07199 599 aaPredicted RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 MCF2P10911 925 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 RFX1P22670 979 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 GUCY2CP25092 1073 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 GJB2P29033 226 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ATP2C1P98194 919 aaPredicted RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 HTR4Q13639 388 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 RILPL1Q5EBL4 403 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 XKR4Q5GH76 650 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 MPZL3Q6UWV2 235 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ALKAL1Q6UXT8 129 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 DTWD2Q8NBA8 298 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 GPR152Q8TDT2 470 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 SNX27Q96L92 541 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ZMAT2Q96NC0 199 aaKnown RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 RTP3Q9BQQ7 232 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 RPP25Q9BUL9 199 aaKnown RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 HCFC1R1Q9NWW0 138 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
TRAV4-201ENST00000390426 CDH7Q9ULB5 785 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 NUMBLQ9Y6R0 609 aa11.73□□□□□ -0.53
TRAV4-201ENST00000390426 MTCL1Q9Y4B5 1905 aaKnown RBP11.72□□□□□ -0.53
TRAV4-201ENST00000390426 NPHP3-ACAD11A0A0J9YXS1 232 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 VWA3AA6NCI4 1184 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 PODXLO00592 558 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 ABLIM1O14639 778 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
TRAV4-201ENST00000390426 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 PROZP22891 400 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 HOXA9P31269 272 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 STRN3Q13033 797 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 UVSSAQ2YD98 709 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 SEZ6Q53EL9 994 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 HYIQ5T013 277 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 PARM1Q6UWI2 310 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 FRMD5Q7Z6J6 570 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
TRAV4-201ENST00000390426 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
TRAV4-201ENST00000390426 TIPINQ9BVW5 301 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 TBC1D17Q9HA65 648 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
TRAV4-201ENST00000390426 BACE2Q9Y5Z0 518 aa11.72□□□□□ -0.53
TRAV4-201ENST00000390426 DOCK8Q8NF50 2099 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 PROB1E7EW31 1015 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.53
TRAV4-201ENST00000390426 PLS3P13797 630 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 KCNE1P15382 129 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 NBL1P41271 181 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 ARPP19P56211 112 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 GPC5P78333 572 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
TRAV4-201ENST00000390426 TMEM130Q8N3G9 435 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 TMEM161BQ8NDZ6 487 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 ING5Q8WYH8 240 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 FGF13Q92913 245 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 FGF14Q92915 247 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 CDK5RAP3Q96JB5 506 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 NTPCRQ9BSD7 190 aaKnown RBP11.71□□□□□ -0.53
TRAV4-201ENST00000390426 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 ANKFY1Q9P2R3 1169 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.53
TRAV4-201ENST00000390426 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
TRAV4-201ENST00000390426 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 VWA8A3KMH1 1905 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 WDFY4Q6ZS81 3184 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms