RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CFAP47Q6ZTR5 3102 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 I3L4J1 428 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PTGESO14684 152 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 ZNF197O14709 1029 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 TM4SF5O14894 197 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 SLC37A4O43826 429 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 KCNK5O95279 499 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 POU2F2P09086 479 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 MYL4P12829 197 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 GJA1P17302 382 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 LIG1P18858 919 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 SPINK2P20155 84 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 IGFBP6P24592 240 aaPredicted RBP10.68□□□□□ -0.7
IFT88-203ENST00000389373 TKTP29401 623 aaKnown RBP10.68□□□□□ -0.7
IFT88-203ENST00000389373 LIMK1P53667 647 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
IFT88-203ENST00000389373 CYP4A11Q02928 519 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PTGDRQ13258 359 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PPP2R5CQ13362 524 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 LRRC32Q14392 662 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 EPHA7Q15375 998 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 INF2Q27J81 1249 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PSAPL1Q6NUJ1 521 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 UNQ6494/PRO21346Q6UXR6 183 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PDZD4Q76G19 769 aaPredicted RBP10.68□□□□□ -0.7
IFT88-203ENST00000389373 MAEAQ7L5Y9 396 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 MAP4K3Q8IVH8 894 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 YAF2Q8IY57 180 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 TTC8Q8TAM2 541 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 ASB16Q96NS5 453 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 RNF26Q9BY78 433 aaPredicted RBP10.68□□□□□ -0.7
IFT88-203ENST00000389373 CXCL16Q9H2A7 254 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 CYP4F11Q9HBI6 524 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 XPNPEP1Q9NQW7 623 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 MTRRQ9UBK8 725 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
IFT88-203ENST00000389373 WDR27A2RRH5 827 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 LRRIQ4A6NIV6 560 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 K7ESF4 209 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 B3GAT3O94766 335 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 ZNF806P0C7X5 589 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 FGFR3P22607 806 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 SOX9P48436 509 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 PXNP49023 591 aaPredicted RBP10.67□□□□□ -0.7
IFT88-203ENST00000389373 SPIRE1Q08AE8 756 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 FOXC1Q12948 553 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 KRT32Q14532 448 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 PRSS36Q5K4E3 855 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 CYP4A22Q5TCH4 519 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 Q6ZS52 159 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 RTL10Q7L3V2 364 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 ELMOD1Q8N336 334 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 FAM200AQ8TCP9 573 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 FAM20AQ96MK3 541 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 ZSWIM3Q96MP5 696 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 CCDC43Q96MW1 224 aaKnown RBP10.67□□□□□ -0.7
IFT88-203ENST00000389373 SLITRK6Q9H5Y7 841 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 ZSWIM4Q9H7M6 989 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 NCOA5Q9HCD5 579 aaKnown RBP10.67□□□□□ -0.7
IFT88-203ENST00000389373 AVENQ9NQS1 362 aaPredicted RBP10.67□□□□□ -0.7
IFT88-203ENST00000389373 SH3GLB2Q9NR46 395 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
IFT88-203ENST00000389373 A0A087WWV3 80 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 A0A1B0GUA9 196 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 SLC38A8A6NNN8 435 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 HEPACAM2A8MVW5 462 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 TBX3O15119 743 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 RECQL4O94761 1208 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 HMGB1P09429 215 aaKnown RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 CCDC192P0DO97 292 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 GLRA2P23416 452 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 CCR2P41597 374 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 BRCC3P46736 316 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 SSRP1Q08945 709 aaKnown RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 NTRK3Q16288 839 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 RNF43Q68DV7 783 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 IQCEQ6IPM2 695 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 MOXD1Q6UVY6 613 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 ANKS3Q6ZW76 656 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 IFNLR1Q8IU57 520 aaPredicted RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 ZSCAN18Q8TBC5 510 aaPredicted RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 DEPDC1BQ8WUY9 529 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 SMARCD2Q92925 531 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 ZNF512Q96ME7 567 aaPredicted RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
IFT88-203ENST00000389373 C2orf42Q9NWW7 574 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 USP20Q9Y2K6 914 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 BACE2Q9Y5Z0 518 aa10.66□□□□□ -0.7
IFT88-203ENST00000389373 RALGAPA1Q6GYQ0 2036 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms