RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PRKCEQ02156 737 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 MMS22LQ6ZRQ5 1243 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CCDC121Q6ZUS5 278 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 MCOLN2Q8IZK6 566 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 MDM1Q8TC05 714 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 NSUN6Q8TEA1 469 aaKnown RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SEC16BQ96JE7 1060 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CDHR1Q96JP9 859 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SELENOSQ9BQE4 189 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 JPH1Q9HDC5 661 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 XPNPEP1Q9NQW7 623 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CYP26B1Q9NR63 512 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 ARHGAP28Q9P2N2 729 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 LCTP09848 1927 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 EXTL3O43909 919 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CHN1P15882 459 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SCP2P22307 547 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 MAN1A1P33908 653 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 LIG4P49917 911 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 ZNF280AP59817 542 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 KRT17Q04695 432 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 PLCB4Q15147 1175 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 WDR44Q5JSH3 913 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SYDE1Q6ZW31 735 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 TAS1R3Q7RTX0 852 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CCDC60Q8IWA6 550 aaPredicted RBP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CHMP6Q96FZ7 201 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 CEP89Q96ST8 783 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 KCNG1Q9UIX4 513 aa12.74□□□□□ -0.37
TRIM23-203ENST00000381018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRIM23-203ENST00000381018 EGFRP00533 1210 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 CALCAP01258 141 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 DRD4P21917 467 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 RXRBP28702 533 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 PIK3CAP42336 1068 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 OAZ1P54368 228 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 BACE1P56817 501 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 CLDN10P78369 228 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 SP4Q02446 784 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 ACTN3Q08043 901 aaPredicted RBP12.73□□□□□ -0.37
TRIM23-203ENST00000381018 PSMD6Q15008 389 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 FBXW10Q5XX13 1052 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
TRIM23-203ENST00000381018 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 C1orf54Q8WWF1 131 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 AS3MTQ9HBK9 375 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
TRIM23-203ENST00000381018 RASGRF2O14827 1237 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 RGS20O76081 388 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 TNNI1P19237 187 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 RRM1P23921 792 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ACTR2P61160 394 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 IFI35P80217 286 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 CENPCQ03188 943 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 STRN3Q13033 797 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ZACNQ401N2 412 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 MIS18BP1Q6P0N0 1132 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 TAOK1Q7L7X3 1001 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 REPS2Q8NFH8 660 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 UHMK1Q8TAS1 419 aaKnown RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ATXN2LQ8WWM7 1075 aaKnown RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 SNF8Q96H20 258 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ACTR5Q9H9F9 607 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 STAM2O75886 525 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 GAS8O95995 478 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 CYP1A1P04798 512 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 ITIH2P19823 946 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 POLGP54098 1239 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-203ENST00000381018 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 SNX1Q13596 522 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 PTK6Q13882 451 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 EMC2Q15006 297 aa12.72□□□□□ -0.37
TRIM23-203ENST00000381018 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms