RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RARGP13631 454 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 PLS3P13797 630 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 MXI1P50539 228 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 ACCSLQ4AC99 568 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 TRPM8Q7Z2W7 1104 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 KIRREL3Q8IZU9 778 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 MTMR14Q8NCE2 650 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 DENND3A2RUS2 1198 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 ATP6V1G2O95670 118 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 GHRP10912 638 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 KRT17Q04695 432 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 GDAP1Q8TB36 358 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 TCP11X1B4DZS4 312 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 UBOX5O94941 541 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 KCNJ2P63252 427 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 MTERF2Q49AM1 385 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 WLSQ5T9L3 541 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 B3GNT9Q6UX72 402 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 DYDC1Q8WWB3 177 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 N4BP2L2Q92802 583 aaPredicted RBP17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 RPS6KC1Q96S38 1066 aa17.38■□□□□ 0.37
NKX3-1-201ENST00000380871 TMEM120BA0PK00 339 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 PLA2G6O60733 806 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 HARSP12081 509 aaKnown RBP17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 BACE1P56817 501 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 TNFAIP8L3Q5GJ75 292 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 FAM71AQ8IYT1 594 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 NOD2Q9HC29 1040 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 ASIC3Q9UHC3 531 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 WDR64B1ANS9 1081 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 ECEL1O95672 775 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 RPSAP08865 295 aaKnown RBP17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 SSTR3P32745 418 aaPredicted RBP17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 PSMC5P62195 406 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 MPP2Q14168 576 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 NEDD9Q14511 834 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 CYP1B1Q16678 543 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 PRUNE1Q86TP1 453 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 CCDC63Q8NA47 563 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 GIMAP7Q8NHV1 300 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 PI4K2AQ9BTU6 479 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 WNT8AQ9H1J5 351 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 KMT5AQ9NQR1 393 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 TBC1D22BQ9NU19 505 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 TBK1Q9UHD2 729 aa17.37■□□□□ 0.37
NKX3-1-201ENST00000380871 HSPA6P17066 643 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 ANO5Q75V66 913 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 KIF2BQ8N4N8 673 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 GGA3Q9NZ52 723 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 MTUS1Q9ULD2 1270 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 L3MBTL1Q9Y468 752 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 O00370 1275 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 SNX3O60493 162 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 RFX1P22670 979 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 CETN1Q12798 172 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 ITIH4Q14624 930 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 VSTM1Q6UX27 236 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 POMGNT1Q8WZA1 660 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 PARP2Q9UGN5 583 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 ZNFX1Q9P2E3 1918 aaKnown RBP17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 CYP11B1P15538 503 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 CALCOCO2Q13137 446 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 SLMAPQ14BN4 828 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 KYNUQ16719 465 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 SGO2Q562F6 1265 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 CYP4X1Q8N118 509 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 PSPC1Q8WXF1 523 aaKnown RBP17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 KCNK9Q9NPC2 374 aa17.36■□□□□ 0.37
NKX3-1-201ENST00000380871 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 PTPRAP18433 802 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 NPTX2P47972 431 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 RWDD2BP57060 319 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 FSTL1Q12841 308 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 P3H4Q92791 437 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 TMEM206Q9H813 350 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 R3HDM2Q9Y2K5 976 aaKnown RBP17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 ZNF862O60290 1169 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 CETPP11597 493 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 ADSSP30520 456 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 NF2P35240 595 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 FMNL3Q8IVF7 1028 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 STAMBPL1Q96FJ0 436 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 TRIM33Q9UPN9 1127 aa17.35■□□□□ 0.37
NKX3-1-201ENST00000380871 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 A8MUI8 341 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CYP1A2P05177 515 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CNGA1P29973 690 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 TMEM132BQ14DG7 1078 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms