RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 DDX1Q92499 740 aaKnown RBP19.21■□□□□ 0.67
HMGN1-203ENST00000380748 TCEAL4Q96EI5 215 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 TRMT61BQ9BVS5 477 aaKnown RBP19.21■□□□□ 0.67
HMGN1-203ENST00000380748 AVENQ9NQS1 362 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-203ENST00000380748 PIAS3Q9Y6X2 628 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 THP07101 528 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 CHRNB1P11230 501 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 FGFR3P22607 806 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 ARL2P36404 184 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 PRSS36Q5K4E3 855 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 IL31Q6EBC2 164 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 MAP4K3Q8IVH8 894 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 DAGLBQ8NCG7 672 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 HAS1Q92839 578 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 JAKMIP1Q96N16 626 aaKnown RBP19.2■□□□□ 0.66
HMGN1-203ENST00000380748 NFKBIZQ9BYH8 718 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 ZSWIM4Q9H7M6 989 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 ZFP14Q9HCL3 533 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
HMGN1-203ENST00000380748 GDI1P31150 447 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 SHC2P98077 582 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 HEATR6Q6AI08 1181 aaKnown RBP19.19■□□□□ 0.66
HMGN1-203ENST00000380748 RTL10Q7L3V2 364 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 TPH2Q8IWU9 490 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 IRF7Q92985 503 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 AIFM3Q96NN9 605 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 CORO1BQ9BR76 489 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 ZNF334Q9HCZ1 680 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-203ENST00000380748 SNTG2Q9NY99 539 aa19.19■□□□□ 0.66
HMGN1-203ENST00000380748 ANKRD11Q6UB99 2663 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 RECQL4O94761 1208 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 PTPN2P17706 415 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 TKTP29401 623 aaKnown RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 CCR2P41597 374 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 SPIRE1Q08AE8 756 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 SF3A2Q15428 464 aaKnown RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 VITQ6UXI7 678 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 FAM160A2Q8N612 972 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 ASB16Q96NS5 453 aa19.18■□□□□ 0.66
HMGN1-203ENST00000380748 POLR3FQ9H1D9 316 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 RBM12Q9NTZ6 932 aaKnown RBP19.18■□□□□ 0.66
HMGN1-203ENST00000380748 IGF2RP11717 2491 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 ARHGEF37A1IGU5 675 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 K7ESF4 209 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 LRG1P02750 347 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 HOXB3P14651 431 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-203ENST00000380748 CCNE1P24864 410 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 PDIA3P30101 505 aaKnown RBP19.17■□□□□ 0.66
HMGN1-203ENST00000380748 HOXC13P31276 330 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 AASDHQ4L235 1098 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-203ENST00000380748 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 LONP2Q86WA8 852 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 SPEM1Q8N4L4 309 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 DDX27Q96GQ7 796 aaKnown RBP19.17■□□□□ 0.66
HMGN1-203ENST00000380748 ZSWIM3Q96MP5 696 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 AGXT2Q9BYV1 514 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 PDZD7Q9H5P4 517 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 TRPV5Q9NQA5 729 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 RXFP3Q9NSD7 469 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 BACE2Q9Y5Z0 518 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 LAMA1P25391 3075 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 NCANO14594 1321 aa19.17■□□□□ 0.66
HMGN1-203ENST00000380748 FASNP49327 2511 aaKnown RBP19.16■□□□□ 0.66
HMGN1-203ENST00000380748 GREB1Q4ZG55 1949 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 WDR27A2RRH5 827 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 I3L4J1 428 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 TM4SF5O14894 197 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 TBX3O15119 743 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 FOXD2O60548 495 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-203ENST00000380748 DGAT1O75907 488 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 B3GAT3O94766 335 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 SLITRK3O94933 977 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 PSMC3P17980 439 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 CNR2P34972 360 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 VIPR2P41587 438 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 LIMK1P53667 647 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 ROR1Q01973 937 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 SSRP1Q08945 709 aaKnown RBP19.16■□□□□ 0.66
HMGN1-203ENST00000380748 PTGDRQ13258 359 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 CCDC6Q16204 474 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 PPP4R3AQ6IN85 833 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 CD300LGQ6UXG3 332 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 Q6ZS52 159 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 NEK8Q86SG6 692 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 FBXL16Q8N461 479 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 SH2B1Q9NRF2 756 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-203ENST00000380748 C2orf42Q9NWW7 574 aa19.16■□□□□ 0.66
HMGN1-203ENST00000380748 LRRIQ4A6NIV6 560 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 TMEM189-UBE2V1I3L0A0 370 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 MARCH6O60337 910 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 PROS1P07225 676 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 CLCNKBP51801 687 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 WDR44Q5JSH3 913 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 ANKS3Q6ZW76 656 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 CEP68Q76N32 757 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 NOSTRINQ8IVI9 506 aa19.15■□□□□ 0.66
HMGN1-203ENST00000380748 SMARCD2Q92925 531 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms