RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NAIF1Q69YI7 327 aaPredicted RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 PDXDC2PQ6P474 469 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 C4orf22Q6V702 233 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 PATL1Q86TB9 770 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 FOXP4Q8IVH2 680 aaPredicted RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 TMA16Q96EY4 203 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 XPO7Q9UIA9 1087 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 PHTF1Q9UMS5 762 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 GOLGA8RI6L899 631 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 EYA4O95677 639 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 P4HBP07237 508 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 NUP107P57740 925 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 KRT76Q01546 638 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 KCTD2Q14681 263 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 WASHC2DQ5SRD0 308 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 RCSD1Q6JBY9 416 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 AIPL1Q9NZN9 384 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 ENO3P13929 434 aaPredicted RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 SLC29A2Q14542 456 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 RBBP7Q16576 425 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 COILP38432 576 aaPredicted RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 E2F7Q96AV8 911 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 ULK4Q96C45 1275 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 GDF11O95390 407 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 HLA-DPA1P20036 260 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 NFKBIAP25963 317 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 ITGA8P53708 1063 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 CC2D2BQ6DHV5 1058 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 FRMD8Q9BZ67 464 aaPredicted RBP17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 ZC3H7BQ9UGR2 993 aaKnown RBP17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 PCSK1NQ9UHG2 260 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 ADCY10Q96PN6 1610 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 SLC16A4O15374 487 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 POTEIP0CG38 1075 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 POTEGQ6S5H5 508 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 POTEEQ6S8J3 1075 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 SPDYE1Q8NFV5 336 aaPredicted RBP17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 SCN3BQ9NY72 215 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 GRID1Q9ULK0 1009 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 TNIP2Q8NFZ5 429 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 UNC45AQ9H3U1 944 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 GIMAP4Q9NUV9 329 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 MFN1Q8IWA4 741 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 CLEC4FQ8N1N0 589 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 GALNT4Q8N4A0 578 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
COL4A3BP-203ENST00000380494 DENND3A2RUS2 1198 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 IGKV5-2P06315 115 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 OSTNP61366 133 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 EFHC2Q5JST6 749 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 RXFP1Q9HBX9 757 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 STK32BQ9NY57 414 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 SMARCAL1Q9NZC9 954 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 BBOX1O75936 387 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 CALB2P22676 271 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 MTMR1Q13613 665 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 UGP2Q16851 508 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 TMEM260Q9NX78 707 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 ABCB11O95342 1321 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 PPP1R3GB7ZBB8 358 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 XPO1O14980 1071 aaKnown RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 H2AFYO75367 372 aaKnown RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDH6P55285 790 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 PIGHQ14442 188 aaPredicted RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 ERFEQ4G0M1 354 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 SPOUT1Q5T280 376 aaKnown RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 MDM1Q8TC05 714 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 SYBUQ9NX95 663 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 WDR35Q9P2L0 1181 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 CYP26A1O43174 497 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 MYL2P10916 166 aa17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 C20orf96Q9NUD7 363 aaPredicted RBP17.96■□□□□ 0.47
COL4A3BP-203ENST00000380494 FKBP6O75344 327 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 MYO1DO94832 1006 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 SKOR1P84550 965 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 C1orf228Q6PIY5 440 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 JADE3Q92613 823 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 KRT35Q92764 455 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 RAB21Q9UL25 225 aa17.96■□□□□ 0.46
COL4A3BP-203ENST00000380494 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 KCNA1Q09470 495 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZNF394Q53GI3 561 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 PPHLN1Q8NEY8 458 aaKnown RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 C9orf72Q96LT7 481 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 ANKZF1Q9H8Y5 726 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 CHMP2BQ9UQN3 213 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 FMO5P49326 533 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 KRT72Q14CN4 511 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRAF7Q6Q0C0 670 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 KLHL4Q9C0H6 718 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms