RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 NUP85Q9BW27 656 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 TARS2Q9BW92 718 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 TRIM31Q9BZY9 425 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 AGO2Q9UKV8 859 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 VNN1O95497 513 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 C4BPAP04003 597 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 CFHP08603 1231 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 PEX5P50542 639 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 PTENP60484 403 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 CLDN10P78369 228 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 SLC20A2Q08357 652 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 UAP1Q16222 522 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 LLGL2Q6P1M3 1020 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 LRRC31Q6UY01 552 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 PHLDB2Q86SQ0 1253 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 GOLGA6L1Q8N7Z2 621 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF564Q8TBZ8 553 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 CD101Q93033 1021 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF653Q96CK0 615 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 TRIM7Q9C029 511 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 SPATC1LQ9H0A9 340 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 SLITRK6Q9H5Y7 841 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 ANKFY1Q9P2R3 1169 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 FBXO40Q9UH90 709 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 STYXL1Q9Y6J8 313 aa8.55□□□□□ -1.04
PDLIM5-204ENST00000380176 TCRBV7S2A1N4TA0A589 114 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 K7ERI5 159 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 OPA1O60313 960 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ARIH2O95376 493 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 HLA-DRAP01903 254 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CYP1A2P05177 515 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 PGK2P07205 417 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 PYGMP11217 842 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF16P17020 682 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 STRN3Q13033 797 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CUL1Q13616 776 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 PSMD6Q15008 389 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 LLGL1Q15334 1064 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TTC19Q6DKK2 380 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 RUFY1Q96T51 708 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ZSWIM1Q9BR11 485 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 MGAMO43451 1857 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 GOLGA8KD6RF30 607 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CNMDO75829 334 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 MTA2O94776 668 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TCF3P15923 654 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 EDNRBP24530 442 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TCF7P36402 384 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 HSD17B3P37058 310 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 NAMPTP43490 491 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 GCNT1Q02742 428 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CAPSQ13938 189 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TARBP2Q15633 366 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ZACNQ401N2 412 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TMEM63BQ5T3F8 832 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ACAD10Q6JQN1 1059 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 MAATS1Q7Z4T9 603 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 USP37Q86T82 979 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TRIM50Q86XT4 487 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CCDC26Q8TAB7 109 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 ATP8B4Q8TF62 1192 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 CPA5Q8WXQ8 436 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 SLC7A3Q8WY07 619 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 SEC14L1Q92503 715 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 C18orf8Q96DM3 657 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 FNBP1Q96RU3 617 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 APOBEC3GQ9HC16 384 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 TXNRD2Q9NNW7 524 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 PLAAQ9Y263 795 aa8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 DIS3Q9Y2L1 958 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-204ENST00000380176 GGPS1O95749 300 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 HARSP12081 509 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 MARK3P27448 753 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 STAT5BP51692 787 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 PPFIA1Q13136 1202 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 CLEC16AQ2KHT3 1053 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 Q3C1V9 767 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 OR5B17Q8NGF7 314 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 DEPTORQ8TB45 409 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 C1orf112Q9NSG2 853 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 CNOT8Q9UFF9 292 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 GTF3C4Q9UKN8 822 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 CSADQ9Y600 493 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 EVPLQ92817 2033 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 UMODL1Q5DID0 1318 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 UNGP13051 313 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 PIK3CAP42336 1068 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 TAGLNQ01995 201 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 BIRC3Q13489 604 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 LEKR1Q6ZMV7 388 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 EGFL6Q8IUX8 553 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 PRELID2Q8N945 189 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 EIF1ADQ8N9N8 165 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 FGD4Q96M96 766 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms