RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 HADHBP55084 474 aaKnown RBP15.94■□□□□ 0.14
PRNP-201ENST00000379440 SLFN12LQ6IEE8 588 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 EMBQ6PCB8 327 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 TRAPPC12Q8WVT3 735 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 KRT35Q92764 455 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 CALR3Q96L12 384 aaKnown RBP15.94■□□□□ 0.14
PRNP-201ENST00000379440 TMEM134Q9H6X4 195 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 LCMT1Q9UIC8 334 aa15.94■□□□□ 0.14
PRNP-201ENST00000379440 LRRC37A2A6NM11 1700 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 PIK3CAP42336 1068 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 MARCKSL1P49006 195 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 ENPEPQ07075 957 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 ZKSCAN8Q15776 578 aaPredicted RBP15.93■□□□□ 0.14
PRNP-201ENST00000379440 ZBTB33Q86T24 672 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 OR5B17Q8NGF7 314 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 KCNN1Q92952 543 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 FAM212AQ96EL1 285 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 SPATA33Q96N06 139 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 AMACRQ9UHK6 382 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 ADGRA2Q96PE1 1338 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 ZBTB42B2RXF5 422 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 RNF40O75150 1001 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 COPB2P35606 906 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 TNFSF9P41273 254 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 GUCY2FP51841 1108 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 ERVK-9P63128 1117 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 WDR44Q5JSH3 913 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 FASTKD5Q7L8L6 764 aaKnown RBP15.93■□□□□ 0.14
PRNP-201ENST00000379440 SRLQ86TD4 932 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 DDX42Q86XP3 938 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRNP-201ENST00000379440 ZNF653Q96CK0 615 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 RNPC3Q96LT9 517 aaKnown RBP15.93■□□□□ 0.14
PRNP-201ENST00000379440 NUP85Q9BW27 656 aa15.93■□□□□ 0.14
PRNP-201ENST00000379440 APOBEC3GQ9HC16 384 aaKnown RBP15.93■□□□□ 0.14
PRNP-201ENST00000379440 GOLGA6BA6NDN3 693 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ZC3H11AO75152 810 aaKnown RBP eCLIP15.92■□□□□ 0.145e-6■■□□□ 11.9
PRNP-201ENST00000379440 GJB1P08034 283 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 COMTP21964 271 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 TCEAL1Q15170 157 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 CAVIN3Q969G5 261 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 CNTNAP2Q9UHC6 1331 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 MCM3APO60318 1980 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 KIAA0391O15091 583 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 CLDN3O15551 220 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 MSCO60682 206 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 LDHAP00338 332 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 TXNP10599 105 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 LAMTOR4Q0VGL1 99 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 PAK2Q13177 524 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 PLCB4Q15147 1175 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ACAD10Q6JQN1 1059 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 C11orf63Q6NUN7 778 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 CCDC62Q6P9F0 684 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ENOSF1Q7L5Y1 443 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ARMC9Q7Z3E5 817 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 RNF149Q8NC42 400 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 ZNF564Q8TBZ8 553 aaPredicted RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 L3MBTL3Q96JM7 780 aaPredicted RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 CELF4Q9BZC1 486 aaKnown RBP15.92■□□□□ 0.14
PRNP-201ENST00000379440 CARD9Q9H257 536 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 TRPC6Q9Y210 931 aa15.92■□□□□ 0.14
PRNP-201ENST00000379440 CCDC188H7C350 402 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 CYP1A2P05177 515 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 IER5Q5VY09 327 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 FAM167AQ96KS9 214 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 TTC7AQ9ULT0 858 aaPredicted RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 ZNFX1Q9P2E3 1918 aaKnown RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 SIP14410 1827 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 UMODL1Q5DID0 1318 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 LGR5O75473 907 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 CLEC16AQ2KHT3 1053 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 C2CD6Q53TS8 623 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 SWT1Q5T5J6 900 aaKnown RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 ATP8B4Q8TF62 1192 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 CGRRF1Q99675 332 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 ERVK-5Q9HDB9 667 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 TTI1O43156 1089 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 SCP2P22307 547 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 BIRC2Q13490 618 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 GJC2Q5T442 439 aaPredicted RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 KCNV1Q6PIU1 500 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 RHPN2Q8IUC4 686 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 CPA5Q8WXQ8 436 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 CCDC113Q9H0I3 377 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 MROH8Q9H579 483 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 GTF3C4Q9UKN8 822 aa15.91■□□□□ 0.14
PRNP-201ENST00000379440 RRP15Q9Y3B9 282 aaKnown RBP15.91■□□□□ 0.14
PRNP-201ENST00000379440 MTA2O94776 668 aa15.9■□□□□ 0.14
PRNP-201ENST00000379440 CFHP08603 1231 aa15.9■□□□□ 0.14
PRNP-201ENST00000379440 ACO1P21399 889 aaKnown RBP15.9■□□□□ 0.14
PRNP-201ENST00000379440 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms